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AT1G35630


Description : Protease-associated (PA) RING/U-box zinc finger family protein


Gene families : OG0000625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G35630

Target Alias Description ECC score Gene Family Method Actions
Als_g04345 No alias storage vacuole protein sorting receptor *(RMR) &... 0.02 OrthoFinder output from all 47 species
Als_g36092 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Ehy_g01137 No alias storage vacuole protein sorting receptor *(RMR) &... 0.02 OrthoFinder output from all 47 species
Msp_g11279 No alias storage vacuole protein sorting receptor *(RMR) &... 0.02 OrthoFinder output from all 47 species
Spa_g48956 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Zm00001e029125_P001 Zm00001e029125 vacuolar sorting receptor (RMR) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
MF GO:0008233 peptidase activity ISS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0003002 regionalization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004029 aldehyde dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004031 aldehyde oxidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006349 regulation of gene expression by genomic imprinting IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
BP GO:0009957 epidermal cell fate specification IEP HCCA
BP GO:0009996 negative regulation of cell fate specification IEP HCCA
BP GO:0010023 proanthocyanidin biosynthetic process IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010061 regulation of trichoblast fate specification IEP HCCA
BP GO:0010062 negative regulation of trichoblast fate specification IEP HCCA
BP GO:0010453 regulation of cell fate commitment IEP HCCA
BP GO:0010454 negative regulation of cell fate commitment IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016623 oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor IEP HCCA
MF GO:0016707 gibberellin 3-beta-dioxygenase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0018479 benzaldehyde dehydrogenase (NAD+) activity IEP HCCA
MF GO:0018488 aryl-aldehyde oxidase activity IEP HCCA
MF GO:0019115 benzaldehyde dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0042659 regulation of cell fate specification IEP HCCA
BP GO:0045596 negative regulation of cell differentiation IEP HCCA
BP GO:0046688 response to copper ion IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048317 seed morphogenesis IEP HCCA
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
MF GO:0070529 L-tryptophan aminotransferase activity IEP HCCA
BP GO:0080022 primary root development IEP HCCA
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903888 regulation of plant epidermal cell differentiation IEP HCCA
BP GO:1903889 negative regulation of plant epidermal cell differentiation IEP HCCA
BP GO:1905421 regulation of plant organ morphogenesis IEP HCCA
BP GO:2000014 regulation of endosperm development IEP HCCA
BP GO:2000067 regulation of root morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR003137 PA_domain 72 139
IPR001841 Znf_RING 232 275
No external refs found!