AT1G35540 (ARF14)

Aliases : ARF14

Description : auxin response factor 14

Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G35540

Target	Alias	Description	ECC score	Gene Family Method
Aop_g12700	ARF6	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g31924	ARF1	ARF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01025691001	ARF16	RNA biosynthesis.transcriptional activation.B3...	0.07	OrthoFinder output from all 47 species
LOC_Os02g46710.1	ARF8, ATARF8,...	Auxin response factor 12 OS=Oryza sativa subsp. indica...	0.03	OrthoFinder output from all 47 species
Len_g14087	ARF1	ARF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_40335g0010	HSS, ARF1-BP, ARF2, ORE14	transcription factor (ARF)	0.05	OrthoFinder output from all 47 species
Msp_g10001	ARF6	ARF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g16843	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g12615	ARF16	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g29541	ARF16	ARF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0009860	pollen tube growth	IEP	HCCA
BP	GO:0009932	cell tip growth	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0048868	pollen tube development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR033389	AUX/IAA_dom	504	546
IPR003340	B3_DNA-bd	126	227
IPR010525	ARF_dom	252	330

External Links

No external refs found!

AT1G35540 (ARF14)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation