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AT1G34260 (FAB1D)


Aliases : FAB1D

Description : FORMS APLOID AND BINUCLEATE CELLS 1A


Gene families : OG0000969 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000969_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G34260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00092160 FAB1B,... Enzyme classification.EC_2 transferases.EC_2.7... 0.03 OrthoFinder output from all 47 species
AT1G71010 FAB1C FORMS APLOID AND BINUCLEATE CELLS 1C 0.03 OrthoFinder output from all 47 species
AT3G14270 FAB1B phosphatidylinositol-4-phosphate 5-kinase family protein 0.05 OrthoFinder output from all 47 species
Als_g15416 FAB1B EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Azfi_s0320.g064478 FAB1B EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Cba_g20791 FAB1A EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Cba_g37344 FAB1A EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
GSVIVT01016674001 FAB1B Enzyme classification.EC_2 transferases.EC_2.7... 0.04 OrthoFinder output from all 47 species
Lfl_g38519 FAB1B EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
MA_20230g0010 FAB1B phosphatidylinositol 3-phosphate 5-kinase (FAB1) 0.02 OrthoFinder output from all 47 species
MA_91814g0010 FAB1B phosphatidylinositol 3-phosphate 5-kinase (FAB1) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012190 FAB1A EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000785 chromatin IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
MF GO:0032451 demethylase activity IEP HCCA
MF GO:0032452 histone demethylase activity IEP HCCA
MF GO:0032453 histone H3K4 demethylase activity IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
MF GO:0140457 protein demethylase activity IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 167 412
IPR002498 PInositol-4-P-5-kinase_core 1219 1387
No external refs found!