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  5. AT1G33475

AT1G33475


Description : SNARE-like superfamily protein


Gene families : OG0001363 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001363_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G33475
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Aev_g04579 VAMP726, ATVAMP726 non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29524.t1 Aspi01Gene29524 non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0176.g056084 No alias non-SNARE-type phytolongin & original description: CDS=1-1422 0.04 OrthoFinder output from all 47 species
Azfi_s0288.g063226 No alias non-SNARE-type phytolongin & original description: CDS=233-1138 0.05 OrthoFinder output from all 47 species
Ceric.13G000800.1 Ceric.13G000800 non-SNARE-type phytolongin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G046400.1 Ceric.37G046400 non-SNARE-type phytolongin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g44291 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03533 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07277 No alias non-SNARE-type phytolongin & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011873 No alias non-SNARE-type phytolongin & original description: CDS=1-1005 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
BP GO:0010065 primary meristem tissue development IEP HCCA
BP GO:0010067 procambium histogenesis IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048508 embryonic meristem development IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA

No InterPro domains available for this sequence

No external refs found!