Heatmap: Cluster_118 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
3.76 3.76 - - - - - - - - - 3.72 - - - - - - - - - - - - - - - - - - - - - - - - - 2.95 - - - - - - - - - -
-2.41 -5.21 2.8 2.7 2.56 -0.64 1.46 0.29 -1.26 -3.85 -3.97 -1.42 -1.3 -5.62 - -1.7 - - -0.7 -2.2 - -4.35 -2.27 -5.1 - -6.01 - -1.22 -0.47 -3.12 -3.8 -0.78 -0.87 0.97 -6.04 1.17 -0.68 -0.34 -0.49 -0.88 - 1.83 1.29 - 2.25 - -6.95 -0.2
-2.44 1.46 - - - - - - - - - -0.01 - 2.68 - 1.8 0.57 - - -2.28 - -0.66 -0.25 -3.16 - -0.72 0.64 - - - - -1.92 -1.34 -1.13 -1.31 -0.22 3.04 3.75 1.6 - - 0.77 - - - - - -
-1.2 0.33 0.57 - -0.24 -5.35 -4.33 - - -4.89 - - - 1.67 0.62 2.04 1.03 1.0 -0.32 1.12 -0.33 1.23 0.61 1.4 -4.3 1.91 -0.46 -1.39 -5.31 - -0.1 -1.02 0.87 0.27 0.57 1.05 -0.23 0.96 -0.22 -4.78 -2.96 -0.8 -0.81 -1.98 -3.3 1.16 -5.93 -2.36
-1.98 1.29 -1.96 -1.77 -2.44 - - - - -4.69 - - - 1.37 0.72 2.09 1.97 2.76 -2.15 -0.21 -1.89 1.0 1.0 -0.25 - 0.56 -3.22 - -3.14 -4.14 0.66 -1.28 0.45 0.39 0.38 2.74 -1.08 0.24 -0.94 - - 0.23 -2.29 - -0.26 - - -1.46
AT1G35750 (PUM10)
0.81 -5.41 - -1.93 - - - - - - - - - - - - - - -3.96 -3.66 - - - -2.05 - -2.07 - - 3.03 - - -4.21 - - 2.32 - 3.56 4.35 - - - - - - - - - -
-3.23 -0.17 -2.21 -3.62 -4.05 - -3.44 - -6.56 - -4.98 -5.12 - 1.83 -1.04 -2.25 -3.57 -0.19 -3.53 1.11 0.58 -1.29 -0.19 1.7 -2.94 2.25 1.25 -2.65 -5.19 -7.02 1.06 -0.93 1.88 2.16 1.01 1.1 0.91 1.59 -0.09 1.54 - -0.07 -1.28 -3.94 -1.52 - - -4.09
-8.74 -5.59 -6.13 - - - - - - - - - - -1.93 -3.59 -4.48 - -5.98 0.09 -7.01 - - - -0.59 -2.68 0.34 0.05 -5.54 -3.48 -7.4 -5.81 - -6.51 -7.42 - -2.85 4.87 3.71 -1.19 - - -3.66 - -2.66 - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - -
AT1G54330 (NAC020)
-1.93 1.74 -3.47 - - - - - - - - - - 0.25 0.46 -1.5 -1.54 -0.12 -1.91 1.39 -3.04 -0.04 1.76 -1.9 - -2.42 - - -6.67 - 1.43 1.29 -0.25 0.06 2.04 2.04 0.31 1.07 -3.45 - - -0.61 1.63 1.81 2.03 -0.19 - 0.48
-1.02 1.82 - - - - - - -1.82 - - -3.2 - 2.43 0.48 1.81 1.35 2.23 -1.67 -0.33 - 0.27 1.61 0.78 - 0.95 - - -0.38 - 1.33 -3.42 0.25 -0.06 1.18 2.63 -2.76 0.71 -0.76 - - -1.59 - - -1.5 - - -
AT1G69588 (CLE45)
-0.15 2.48 -2.18 -1.97 -2.14 -0.25 -1.86 - - - -2.15 -3.06 - 1.21 -0.88 0.29 -1.31 0.18 -3.14 1.37 -1.15 0.52 1.97 -1.16 -2.94 -2.01 -3.66 0.39 -2.15 -5.33 1.09 0.12 0.45 0.49 2.13 0.47 -0.93 0.78 -1.1 -3.34 - 0.46 0.87 -0.54 1.72 - - 0.04
AT2G03440 (NRP1)
-2.6 0.62 -1.43 -1.81 -0.36 1.1 -0.85 1.54 0.72 -1.66 -2.03 -12.83 -6.92 0.7 -0.18 0.77 1.21 0.85 0.7 1.11 1.53 1.12 1.18 -0.07 -1.47 0.3 0.39 -4.39 -7.31 -1.6 -0.56 -0.33 0.36 -0.34 -0.17 0.33 0.49 0.65 0.51 -4.59 -3.81 -1.24 -1.82 -2.18 -2.11 - 0.91 -2.88
AT2G18380 (GATA20)
-1.51 2.13 -5.73 - - - - - - -7.12 - - - 1.39 0.49 0.82 0.32 0.69 -1.63 1.77 -2.1 0.97 1.55 -0.82 - -1.19 - 0.11 -3.94 -5.34 1.27 0.15 0.91 0.2 1.71 1.02 -0.61 0.84 -1.4 - - -0.08 -0.01 1.97 0.7 - - 0.5
AT2G24790 (COL3)
-1.34 1.13 -2.31 -3.41 -2.3 -2.95 -3.29 -4.99 -6.73 -6.95 -7.49 -11.36 -7.81 1.13 -0.02 0.94 1.45 0.94 -0.97 1.32 1.19 1.11 0.9 1.04 -3.71 1.35 -0.17 -0.8 -1.59 -7.37 0.57 -0.42 0.8 0.33 -0.02 0.75 1.2 0.81 1.03 -1.33 -1.26 -0.62 -0.01 -0.25 -1.02 -0.4 -5.0 -0.89
- 1.73 -4.35 - -1.58 0.63 -5.14 -5.74 - -6.75 -5.8 - -3.35 2.43 2.09 1.13 0.52 1.53 -4.83 -0.49 -2.41 2.18 1.19 0.67 - 0.77 - - -6.57 - -1.55 -6.77 0.53 - -1.76 3.47 -2.76 0.37 -0.51 - - - - - - - - -
AT2G36050 (OFP15)
-1.9 1.87 -5.77 -7.76 -5.75 -6.62 - - -6.95 -9.32 - - -7.43 0.14 1.27 1.58 3.29 -0.51 -2.94 1.46 -1.08 -0.31 0.56 1.17 -7.99 1.66 -5.18 1.32 -2.16 -8.48 1.16 -1.33 1.4 0.16 0.72 -1.84 -7.9 -0.71 -0.22 -4.52 - -1.18 -1.43 -0.34 -0.02 -5.3 - -0.31
0.1 0.81 0.54 0.89 0.34 0.54 0.93 -0.6 -1.1 -3.05 -2.3 -0.17 -3.75 0.47 0.8 0.27 0.12 -0.53 -1.33 0.61 0.4 0.44 0.47 0.16 -1.96 0.35 0.19 0.69 0.77 -3.52 0.07 -0.26 0.29 -0.05 -0.06 0.56 0.55 0.43 -0.03 -1.03 -2.62 0.34 -0.04 -0.0 -0.42 -7.53 -9.81 -0.82
-3.53 1.37 -3.13 - -3.19 -2.05 - -4.6 - -6.19 - - -5.37 2.34 2.12 1.66 1.88 2.5 -3.01 -0.12 -1.41 1.96 1.16 0.48 - 0.57 - - - - -0.56 -6.09 0.2 -3.62 -0.07 2.94 -1.81 -0.2 -1.04 - - -2.35 - -4.99 -5.58 - -8.62 -
AT2G45350 (CRR4)
-4.38 -0.05 1.2 -0.25 -1.34 -0.89 -0.25 - -3.5 -4.91 - -2.54 - 0.46 1.34 1.95 -0.23 -0.5 -2.55 -0.06 0.14 2.39 1.02 0.91 -5.24 1.36 - 0.81 1.48 - -0.54 1.04 1.2 0.72 -0.49 -0.58 0.55 0.95 -0.29 -0.76 - -2.4 -3.33 -1.14 -2.31 - - -2.71
-3.44 -4.71 - - - - - - - -6.94 - - - 2.77 2.28 3.65 -4.62 -4.15 -4.3 -4.54 -4.66 - - -1.81 - 0.13 -5.55 - -4.85 - -4.25 3.07 0.24 -4.17 -4.82 - -0.99 2.03 2.93 - - - - - - - - -
0.62 1.21 0.8 0.16 -0.03 -2.93 0.5 -7.25 - -6.06 - - - 0.54 0.42 0.21 0.27 -0.41 -1.74 0.91 0.08 0.4 0.77 0.27 -1.32 0.44 -0.48 0.75 1.84 -1.4 0.67 0.22 -0.24 -0.64 0.24 -0.08 1.08 0.14 0.68 -4.68 -1.43 -1.13 -0.13 0.88 -0.46 -5.29 -0.18 -0.29
0.96 1.52 1.65 0.34 0.99 0.97 0.57 - - - - - - 1.28 2.68 -0.99 -0.5 - - 0.26 -2.1 0.13 -0.38 0.17 - -0.34 -1.85 0.47 0.95 -2.76 -1.28 -0.79 1.19 0.81 -0.76 -0.97 -0.46 0.51 -0.31 - - -0.97 -0.3 1.02 - - -0.49 0.25
AT3G18485 (ILR2)
-2.5 -0.96 - -3.1 -3.28 -2.08 - - - - - - - -1.94 -2.12 0.52 -1.02 0.39 -1.63 -1.08 0.49 -2.14 - 1.44 0.05 1.21 2.7 2.73 1.06 -0.8 -1.63 -0.21 1.41 0.6 -1.45 -0.6 1.09 0.16 2.8 -1.41 - -0.61 -3.1 - -1.52 - -0.49 -
- 0.51 - - - - - - - - - - 4.69 1.36 - - - - - - - - 1.9 -2.69 - -0.32 1.7 - - - - - - 0.06 - - 1.94 1.47 0.09 - - - - - - - - 0.69
AT3G48590 (HAP5A)
-0.95 0.49 -1.4 -1.33 -1.28 -0.79 -1.15 -0.23 0.12 -1.13 -0.27 -8.75 -1.19 0.37 -0.23 1.06 0.38 -0.03 0.03 0.65 0.8 0.73 0.63 0.45 -1.77 1.09 0.86 -0.37 -2.22 -2.36 0.56 -0.16 0.4 0.08 0.23 0.22 0.18 0.48 0.71 -3.65 -5.51 -0.28 -0.4 -0.1 -0.22 1.24 0.85 -1.04
2.7 -6.86 -3.61 - - - - - - - - - 0.15 -0.51 0.4 -2.29 -4.33 -4.45 -5.7 -6.42 - -4.57 - -1.25 -3.54 -1.09 0.14 - -1.86 - - -1.27 0.27 0.89 -3.64 -2.13 3.24 -0.43 3.2 1.86 - 2.29 0.7 -2.46 0.6 -2.71 - -1.41
-1.08 0.37 -2.2 -1.68 -1.17 -1.88 -1.52 -3.68 -5.48 -6.25 -7.02 - -3.14 -0.62 0.58 1.56 3.69 -0.53 -3.13 0.06 1.09 1.43 -0.53 0.15 0.84 0.88 -0.54 -2.1 -1.24 0.12 -0.92 1.62 0.15 0.39 -1.67 0.04 -0.14 -0.23 0.06 -1.37 -4.23 -1.93 -1.81 -1.28 -2.88 - -4.04 -2.74
- -3.66 - - - - - - - - - - -4.69 4.12 2.04 -1.29 -1.37 -0.82 -1.03 -1.4 -2.97 - -1.5 -1.45 -4.1 -1.11 - - - -5.58 -6.21 3.02 -1.48 -3.53 1.02 -0.38 1.31 3.04 -0.88 - - -2.84 - - - - - -
-0.43 0.92 -0.24 -0.29 -2.09 -7.23 -0.28 - - -8.61 - - - 0.79 -1.33 -0.99 -0.85 -0.27 -4.13 0.23 0.02 -0.01 0.81 -0.33 -5.69 -0.81 -3.76 -0.73 0.28 -7.77 0.63 0.15 -0.44 0.84 0.0 0.68 -0.21 0.76 0.21 - -5.58 2.12 2.47 2.27 0.87 - -11.32 1.2
- -3.33 - 0.53 - - - - - - - - - 1.86 - - - - - - - - - -0.87 1.18 1.36 5.1 - - - -1.92 - - - - - - 1.47 -3.34 - - - - - - - - -
0.12 -1.17 0.32 -4.21 0.89 -4.63 -3.61 - - -6.84 - -5.27 - -1.31 -3.18 -2.66 -1.07 0.33 -1.47 -2.97 -2.49 -1.72 -2.26 -3.2 - -2.58 0.45 -1.23 -2.2 -2.13 -2.73 0.09 -0.8 0.08 -2.01 -0.44 -0.22 -1.71 1.15 -3.21 -1.61 4.29 1.44 -2.99 2.66 -3.82 - -0.68
-1.33 1.95 - - - - - - - - - - -2.78 0.8 -1.59 0.62 -0.89 0.09 -2.05 1.84 -2.05 1.31 2.17 -0.12 - -0.57 -4.54 -2.96 -4.11 - 1.97 1.21 1.17 0.05 1.71 1.83 -0.89 0.72 -0.74 - - -0.67 0.5 0.76 0.95 - - -0.49
-1.22 1.81 - - - - - - - - - - - 2.04 0.13 2.07 2.41 2.81 -3.11 -0.29 -0.96 0.43 0.56 0.54 - 0.55 - - -2.15 - 1.24 -3.66 0.6 -0.2 0.92 2.17 -0.33 0.09 -0.9 - - -0.07 -4.47 -3.86 -2.45 - - -4.58
-4.41 1.35 - - - - - - -3.57 -4.84 - - - 1.94 0.85 1.91 1.9 2.82 -4.99 -0.75 -1.35 1.22 0.49 0.48 -3.55 0.39 -1.28 - -5.56 -5.96 -1.0 -2.34 1.05 -0.26 0.56 2.69 0.09 0.56 -0.51 - - 0.87 -4.13 -3.55 -1.55 - - -
AT4G17905 (ATL4H)
-4.06 2.0 -5.67 - - - - - - - - - - 1.66 0.96 0.97 -0.65 0.38 -2.19 1.34 -0.3 1.61 1.68 -0.25 -5.88 -0.57 -3.17 -4.35 -3.95 -4.26 0.93 -0.37 0.58 0.43 1.69 1.76 -0.21 1.41 -1.72 0.08 - 0.66 0.19 -1.21 1.0 -2.04 -0.77 -1.72
-0.66 1.6 -3.13 -4.22 -5.27 - -3.57 - - - - - - 2.32 1.83 1.15 0.86 1.03 -3.78 -0.56 -2.61 2.01 1.6 0.42 -7.22 0.49 -5.1 - -5.49 -8.56 -0.74 -5.4 0.16 -2.31 0.03 3.52 -0.42 1.15 -0.44 -4.65 - -3.81 - - -1.51 - - -6.82
-0.98 1.94 - - - - - - - -7.27 -6.85 - - 0.86 0.08 0.7 0.24 0.62 -1.76 1.33 -4.16 0.37 1.55 -0.47 -1.35 -0.64 0.35 -0.27 -0.76 -1.36 1.33 -0.18 0.41 -0.15 1.03 0.21 -0.06 1.02 -0.12 -3.54 2.85 -1.17 -0.98 0.97 -0.27 - - -0.51
-1.77 1.5 -2.77 -2.9 -0.91 -0.34 -3.12 -4.17 -5.15 -6.51 -5.83 -0.92 -4.6 1.61 0.9 1.61 1.79 2.25 -1.6 -0.01 -1.73 1.34 1.3 0.6 - 0.78 - - - -7.64 0.92 -2.47 0.83 -0.7 0.77 2.79 -0.53 0.69 -0.74 - - -1.98 -4.71 - -3.11 - - -
AT5G18930 (BUD2)
-1.58 2.33 -6.13 -2.6 -4.02 -4.73 -2.03 - - - - - - 1.17 -0.28 -0.26 -1.56 -2.68 -0.7 1.56 -0.68 0.5 1.32 0.54 -5.34 -0.36 -3.87 1.68 -3.44 -5.74 2.3 -0.08 0.76 0.1 1.49 1.34 0.42 1.2 0.56 - - -1.23 0.07 -0.17 0.7 - - -0.12
2.08 -0.41 2.19 -0.13 2.42 0.71 -0.58 0.15 -1.14 -0.65 -0.94 -2.72 -1.03 -1.04 0.05 -1.78 -1.28 -2.46 -1.29 -0.44 -2.69 -1.13 -2.23 -1.34 -1.9 -1.4 -0.83 0.37 0.67 -0.29 -1.01 -0.52 -1.24 -0.57 -0.84 -1.19 -0.82 -1.13 0.12 2.43 -2.62 -1.48 -1.5 -0.71 -1.4 1.66 -0.79 -1.13
-2.85 -0.7 -3.94 -3.6 -4.07 -4.94 -5.15 -6.49 - -7.58 - -4.97 -4.94 -0.83 0.08 -0.05 -2.92 -3.81 -1.89 -0.58 -2.14 0.81 0.0 -0.52 0.03 0.31 -1.54 0.14 -0.45 0.24 -1.75 -0.57 2.48 3.1 -1.32 -0.65 0.33 1.7 -0.11 1.83 1.27 -1.07 -4.15 -1.18 1.35 - 1.41 -3.22
- 1.79 - 3.33 - - 2.21 - - - - - - - 2.43 0.44 - - -0.58 0.1 1.0 0.94 1.34 0.25 - - 1.48 - -0.89 - -1.02 - - - -0.36 - - 3.13 -1.93 - - - - - - - -2.96 -
-1.37 1.28 - - - - - - - - - -0.2 -0.09 1.79 0.55 1.71 1.88 2.27 -1.23 0.03 -2.5 0.61 0.62 0.39 -2.01 -0.01 0.91 -1.23 -3.01 - 0.31 -1.62 0.47 0.31 1.02 2.49 0.12 0.26 -1.08 - - 0.39 -2.87 -3.84 -0.52 - - -2.6
- -2.26 0.34 - - - - - - -1.84 - - 1.99 3.29 0.75 - - - - - - - - - 0.34 - 2.71 -0.21 -0.67 - - - 3.18 - - - - 3.5 0.21 - - - - - - - - -
-0.38 0.63 -2.89 -2.73 -1.57 -0.86 -1.51 1.62 - 0.17 -6.06 -6.46 -0.82 1.62 2.05 1.78 2.01 2.54 -0.34 -0.37 -2.0 1.39 1.05 0.28 -7.4 0.36 -3.71 -2.55 -0.4 -6.82 -1.39 -2.78 0.65 -3.19 -0.36 1.74 -1.52 0.09 -1.02 -2.01 - -4.41 -4.58 -2.73 -3.73 - - -3.87
-0.1 0.24 1.01 -0.54 0.86 0.04 0.39 -0.99 -2.3 -2.33 -2.08 1.65 -3.21 1.86 0.79 -0.16 0.03 0.85 -1.83 -0.78 -4.59 1.67 1.77 -0.56 -6.67 -0.99 -6.28 -1.2 -3.36 -3.95 -1.69 -2.23 0.06 -2.08 1.2 3.06 -0.91 0.65 -0.52 -4.63 - -5.41 -3.34 -0.88 -3.32 - - -1.98
0.76 0.52 - - - - - - - - - 1.79 2.28 - - -0.85 - - - -0.04 - - - -0.73 - -1.64 - 0.51 -0.95 - - 0.74 1.07 0.28 - 1.39 - -0.02 2.52 - - 2.39 - - 3.65 - - -
AT5G62940 (HCA2)
-1.06 1.63 -6.06 - -7.46 -7.14 - - - - - - - 1.23 0.55 1.69 1.39 1.73 -1.47 1.38 -0.73 1.43 1.48 0.27 -5.63 0.26 -5.23 -6.74 -2.62 -4.38 1.15 0.05 1.22 0.64 1.96 1.26 -0.26 1.3 -0.65 -1.7 - -0.86 -1.74 -1.94 -0.3 - - -3.42
AT5G63470 (NF-YC4)
-1.43 0.45 -1.52 -1.12 -0.45 0.86 -0.43 1.13 0.83 -0.36 0.18 -9.57 -0.19 0.33 -1.05 0.61 0.54 0.14 0.32 0.88 1.11 0.27 0.27 0.47 -3.56 0.84 0.2 -0.48 -1.68 -6.12 0.72 0.02 0.07 0.22 -0.18 0.14 -0.7 0.11 0.04 -3.29 -3.27 0.26 0.39 -0.57 -0.17 0.37 -0.33 -0.92

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.