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AT1G31760


Description : SWIB/MDM2 domain superfamily protein


Gene families : OG0001482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G31760
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00260300 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
Cba_g26170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019325001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01036871001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os03g55310.1 LOC_Os03g55310 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Pir_g20274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013551_P001 Zm00001e013551 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025309_P001 Zm00001e025309 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0016048 detection of temperature stimulus IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044030 regulation of DNA methylation IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0048653 anther development IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 37 108
No external refs found!