AT1G30950 (UFO)

Aliases : UFO

Description : F-box family protein

Gene families : OG0002287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002287_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G30950
Cluster	HCCA: Cluster_123

Target	Alias	Description	ECC score	Gene Family Method
Aob_g30684	UFO	substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Ceric.34G021600.1	UFO, Ceric.34G021600	substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase...	0.04	OrthoFinder output from all 47 species
Dcu_g07624	UFO	substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Dde_g29819	UFO	substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
GSVIVT01012147001	UFO	Protein degradation.peptide tagging.Ubiquitin...	0.04	OrthoFinder output from all 47 species
Gb_27655	UFO	component UFO of SCF E3 ubiquitin ligase complex	0.07	OrthoFinder output from all 47 species
LOC_Os06g45460.1	UFO, LOC_Os06g45460	component UFO of SCF E3 ubiquitin ligase complex	0.06	OrthoFinder output from all 47 species
Len_g05411	UFO	substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
MA_12325g0010	UFO	component UFO of SCF E3 ubiquitin ligase complex	0.05	OrthoFinder output from all 47 species
MA_72695g0010	HS, HWS	component UFO of SCF E3 ubiquitin ligase complex	0.03	OrthoFinder output from all 47 species
Ppi_g14694	UFO	substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0165.g024094	UFO	substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase...	0.05	OrthoFinder output from all 47 species
Solyc02g081670.1.1	UFO, Solyc02g081670	component UFO of SCF E3 ubiquitin ligase complex	0.03	OrthoFinder output from all 47 species
Tin_g03384	UFO	substrate(LEAFY) adaptor of SCF E3 ubiquiTin ligase...	0.03	OrthoFinder output from all 47 species
Zm00001e037737_P001	UFO, Zm00001e037737	component UFO of SCF E3 ubiquitin ligase complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IPI	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IMP	Interproscan
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IDA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	RCA	Interproscan
BP	GO:0006511	ubiquitin-dependent protein catabolic process	TAS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008134	transcription factor binding	IPI	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009933	meristem structural organization	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	IGI	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0042752	regulation of circadian rhythm	RCA	Interproscan
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0048532	anatomical structure arrangement	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
CC	GO:1990234	transferase complex	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009798	axis specification	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0009909	regulation of flower development	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0009943	adaxial/abaxial axis specification	IEP	HCCA
BP	GO:0009947	centrolateral axis specification	IEP	HCCA
BP	GO:0010022	meristem determinacy	IEP	HCCA
BP	GO:0010074	maintenance of meristem identity	IEP	HCCA
BP	GO:0010077	maintenance of inflorescence meristem identity	IEP	HCCA
BP	GO:0010338	leaf formation	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
BP	GO:0010582	floral meristem determinacy	IEP	HCCA
BP	GO:0010865	stipule development	IEP	HCCA
BP	GO:0019827	stem cell population maintenance	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	HCCA
MF	GO:0031490	chromatin DNA binding	IEP	HCCA
BP	GO:0031537	regulation of anthocyanin metabolic process	IEP	HCCA
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	HCCA
BP	GO:0035265	organ growth	IEP	HCCA
BP	GO:0040009	regulation of growth rate	IEP	HCCA
MF	GO:0043621	protein self-association	IEP	HCCA
BP	GO:0045927	positive regulation of growth	IEP	HCCA
BP	GO:0046620	regulation of organ growth	IEP	HCCA
BP	GO:0046622	positive regulation of organ growth	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048445	carpel morphogenesis	IEP	HCCA
BP	GO:0048513	animal organ development	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0048580	regulation of post-embryonic development	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048639	positive regulation of developmental growth	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
BP	GO:0048831	regulation of shoot system development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0098727	maintenance of cell number	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:2000026	regulation of multicellular organismal development	IEP	HCCA
BP	GO:2000241	regulation of reproductive process	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001810	F-box_dom	46	81

External Links

No external refs found!

AT1G30950 (UFO)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation