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  5. AT1G30930

AT1G30930


Description : F-box family protein


Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G30930
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT1G30780 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT1G30925 No alias phospholipase Cs 0.09 OrthoFinder output from all 47 species
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.05 OrthoFinder output from all 47 species
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT1G46840 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G67130 No alias F-box family protein 0.07 OrthoFinder output from all 47 species
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT2G23160 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT2G31470 DOR F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from all 47 species
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G47140 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G61340 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G38810 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.07 OrthoFinder output from all 47 species
AT5G50220 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.07 OrthoFinder output from all 47 species
AT5G62660 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 204 320
IPR001810 F-box_dom 4 41
No external refs found!