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Description : F-box associated ubiquitination effector family protein
Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G30780 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G19160 | No alias | F-box family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G23037 | No alias | F-box associated ubiquitination effector family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G30790 | No alias | F-box and associated interaction domains-containing protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G30920 | No alias | F-box family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G30930 | No alias | F-box family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G32420 | No alias | F-box and associated interaction domains-containing protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G47765 | No alias | F-box and associated interaction domains-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G48060 | No alias | F-box and associated interaction domains-containing protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G53815 | No alias | F-box family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G59690 | No alias | F-box associated ubiquitination effector family protein | 0.08 | OrthoFinder output from all 47 species | |
| AT1G61060 | No alias | F-box family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G67130 | No alias | F-box family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G02890 | No alias | F-box family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G16220 | No alias | F-box and associated interaction domains-containing protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G16810 | No alias | F-box and associated interaction domains-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G23160 | No alias | F-box family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G10990 | No alias | F-box associated ubiquitination effector family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G52320 | No alias | F-box and associated interaction domains-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G13060 | No alias | F-box associated ubiquitination effector family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G19930 | No alias | F-box and associated interaction domains-containing protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G29970 | No alias | F-box and associated interaction domains-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G22791 | No alias | F-box family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G50220 | No alias | F-box family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G52610 | No alias | F-box and associated interaction domains-containing protein | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| BP | GO:0006863 | purine nucleobase transport | IEP | HCCA |
| BP | GO:0010228 | vegetative to reproductive phase transition of meristem | IEP | HCCA |
| BP | GO:0010528 | regulation of transposition | IEP | HCCA |
| BP | GO:0010529 | negative regulation of transposition | IEP | HCCA |
| BP | GO:0015851 | nucleobase transport | IEP | HCCA |
| BP | GO:0031056 | regulation of histone modification | IEP | HCCA |
| BP | GO:0031057 | negative regulation of histone modification | IEP | HCCA |
| BP | GO:0031058 | positive regulation of histone modification | IEP | HCCA |
| BP | GO:0031060 | regulation of histone methylation | IEP | HCCA |
| BP | GO:0031062 | positive regulation of histone methylation | IEP | HCCA |
| BP | GO:0031400 | negative regulation of protein modification process | IEP | HCCA |
| BP | GO:0031401 | positive regulation of protein modification process | IEP | HCCA |
| MF | GO:0031490 | chromatin DNA binding | IEP | HCCA |
| BP | GO:0035065 | regulation of histone acetylation | IEP | HCCA |
| BP | GO:0035067 | negative regulation of histone acetylation | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051248 | negative regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051570 | regulation of histone H3-K9 methylation | IEP | HCCA |
| BP | GO:0051574 | positive regulation of histone H3-K9 methylation | IEP | HCCA |
| BP | GO:1900109 | regulation of histone H3-K9 dimethylation | IEP | HCCA |
| BP | GO:1900111 | positive regulation of histone H3-K9 dimethylation | IEP | HCCA |
| BP | GO:1901983 | regulation of protein acetylation | IEP | HCCA |
| BP | GO:1901984 | negative regulation of protein acetylation | IEP | HCCA |
| BP | GO:2000756 | regulation of peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:2000757 | negative regulation of peptidyl-lysine acetylation | IEP | HCCA |
| No external refs found! |