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  5. AT1G29800

AT1G29800


Description : RING/FYVE/PHD-type zinc finger family protein


Gene families : OG0000821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G29800
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT3G43230 No alias RING/FYVE/PHD-type zinc finger family protein 0.04 OrthoFinder output from all 47 species
Ala_g33149 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Als_g07342 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Aspi01Gene60752.t1 Aspi01Gene60752 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G042800.1 Ceric.37G042800 auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Ehy_g18591 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.04 OrthoFinder output from all 47 species
Ehy_g22381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014153001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01015009001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_38623 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g35910.1 LOC_Os06g35910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g01836 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Len_g14701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g11370.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g15854 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Ore_g36752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09624 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.04 OrthoFinder output from all 47 species
Ppi_g01148 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Ppi_g46215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g071980.3.1 Solyc02g071980 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc07g017500.3.1 Solyc07g017500 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g04203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17958 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Spa_g31118 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.04 OrthoFinder output from all 47 species
Zm00001e024905_P001 Zm00001e024905 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0007165 signal transduction ISS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
MF GO:0035091 phosphatidylinositol binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003837 beta-ureidopropionase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006208 pyrimidine nucleobase catabolic process IEP HCCA
BP GO:0006212 uracil catabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009608 response to symbiont IEP HCCA
BP GO:0009610 response to symbiotic fungus IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010260 obsolete animal organ senescence IEP HCCA
BP GO:0016036 cellular response to phosphate starvation IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019374 galactolipid metabolic process IEP HCCA
BP GO:0019375 galactolipid biosynthetic process IEP HCCA
BP GO:0019860 uracil metabolic process IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046113 nucleobase catabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046482 para-aminobenzoic acid metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0072529 pyrimidine-containing compound catabolic process IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 181 246
IPR007461 Ysc84_actin-binding 364 488
No external refs found!