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AT1G29470


Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein


Gene families : OG0000974 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000974_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G29470
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00185010 evm_27.TU.AmTr_v1... Probable methyltransferase PMT27 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g059056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14663 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aev_g24367 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g02312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08810 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g01118 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g10194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10598 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g19468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015100 No alias not classified & original description: CDS=38-2224 0.05 OrthoFinder output from all 47 species
Azfi_s0081.g038650 No alias not classified & original description: CDS=64-1644 0.05 OrthoFinder output from all 47 species
Ceric.01G093300.1 Ceric.01G093300 not classified & original description: pacid=50592609... 0.06 OrthoFinder output from all 47 species
Ceric.1Z024400.1 Ceric.1Z024400 not classified & original description: pacid=50628340... 0.05 OrthoFinder output from all 47 species
Dac_g06744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05763 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03454 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g04948 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g08555 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08606 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008776001 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
GSVIVT01026451001 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01032763001 No alias Probable methyltransferase PMT23 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Gb_16057 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_34663 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os01g66110.1 LOC_Os01g66110 Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
LOC_Os03g56380.1 LOC_Os03g56380 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Len_g07789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02168 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03345 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g04184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g39798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g04590.1 No alias Probable methyltransferase PMT24 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g13792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g10885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25398 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g25668 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003626 No alias not classified & original description: CDS=40-2169 0.02 OrthoFinder output from all 47 species
Sam_g14960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo140935 No alias Probable methyltransferase PMT27 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Smo170677 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Solyc04g063230.3.1 Solyc04g063230 Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Solyc04g080360.4.1 Solyc04g080360 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
Solyc05g052500.4.1 Solyc05g052500 Probable methyltransferase PMT23 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc05g056580.3.1 Solyc05g056580 Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g06976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15882 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005847_P001 Zm00001e005847 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Zm00001e028600_P001 Zm00001e028600 Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005768 endosome IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
CC GO:0005802 trans-Golgi network IDA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009833 plant-type primary cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
CC GO:0010005 cortical microtubule, transverse to long axis IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010289 homogalacturonan biosynthetic process IEP HCCA
CC GO:0010330 cellulose synthase complex IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
BP GO:0010394 homogalacturonan metabolic process IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0033843 xyloglucan 6-xylosyltransferase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0040007 growth IEP HCCA
CC GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0045489 pectin biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0052325 cell wall pectin biosynthetic process IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
CC GO:0055028 cortical microtubule IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 250 746
No external refs found!