1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G28140

AT1G28140


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).


Gene families : OG0005659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005659_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G28140
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00087320 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Adi_g103084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05096 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g00589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G047300.1 Ceric.13G047300 not classified & original description: pacid=50636270... 0.05 OrthoFinder output from all 47 species
Dcu_g14737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18116 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_06458 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g63360.1 LOC_Os03g63360 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Lfl_g03879 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_10430187g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g14057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00443 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c8_12800V3.1 Pp3c8_12800 No annotation 0.03 OrthoFinder output from all 47 species
Ppi_g00719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo270181 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g08050 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e006369_P002 Zm00001e006369 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005982 starch metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
MF GO:0009977 proton motive force dependent protein transmembrane transporter activity IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
BP GO:0010478 chlororespiration IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0019252 starch biosynthetic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0031361 obsolete integral component of thylakoid membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
CC GO:0033281 TAT protein transport complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043235 receptor complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0080005 photosystem stoichiometry adjustment IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR019275 DUF2301 121 259
No external refs found!