Description : Paired amphipathic helix (PAH2) superfamily protein
Gene families : OG0000547 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000547_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT1G27250 | |
Cluster | HCCA: Cluster_105 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G24200 | No alias | Paired amphipathic helix (PAH2) superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
AT1G24220 | No alias | paired amphipathic helix repeat-containing protein | 0.09 | OrthoFinder output from all 47 species | |
AT1G24230 | No alias | Paired amphipathic helix (PAH2) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT1G27240 | No alias | Paired amphipathic helix (PAH2) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G15030 | No alias | Paired amphipathic helix (PAH2) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G15040 | No alias | Paired amphipathic helix (PAH2) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G35610 | No alias | Paired amphipathic helix (PAH2) superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
Adi_g066433 | SNL4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g103365 | SNL4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_21090g0010 | SNL2 | Paired amphipathic helix protein Sin3-like 2... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g29972 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g049250.1.1 | Solyc07g049250 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | ND | Interproscan |
CC | GO:0005634 | nucleus | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005200 | structural constituent of cytoskeleton | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
CC | GO:0019005 | SCF ubiquitin ligase complex | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003822 | PAH | 39 | 82 |
No external refs found! |