AT1G26680

Description : transcriptional factor B3 family protein

Gene families : OG0009289 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009289_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G26680
Cluster	HCCA: Cluster_47

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001076	obsolete transcription factor activity, RNA polymerase II transcription factor binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0008300	isoprenoid catabolic process	IEP	HCCA
BP	GO:0009556	microsporogenesis	IEP	HCCA
BP	GO:0009685	gibberellin metabolic process	IEP	HCCA
BP	GO:0009686	gibberellin biosynthetic process	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0009838	abscission	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0009900	dehiscence	IEP	HCCA
BP	GO:0009910	negative regulation of flower development	IEP	HCCA
BP	GO:0010047	fruit dehiscence	IEP	HCCA
BP	GO:0010262	somatic embryogenesis	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0016101	diterpenoid metabolic process	IEP	HCCA
BP	GO:0016102	diterpenoid biosynthetic process	IEP	HCCA
BP	GO:0016103	diterpenoid catabolic process	IEP	HCCA
BP	GO:0016115	terpenoid catabolic process	IEP	HCCA
BP	GO:0031099	regeneration	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031930	mitochondria-nucleus signaling pathway	IEP	HCCA
BP	GO:0032870	cellular response to hormone stimulus	IEP	HCCA
BP	GO:0034293	sexual sporulation	IEP	HCCA
BP	GO:0043934	sporulation	IEP	HCCA
BP	GO:0045487	gibberellin catabolic process	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0048236	plant-type sporogenesis	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0048577	negative regulation of short-day photoperiodism, flowering	IEP	HCCA
BP	GO:0048587	regulation of short-day photoperiodism, flowering	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051321	meiotic cell cycle	IEP	HCCA
BP	GO:0052386	cell wall thickening	IEP	HCCA
BP	GO:0052543	callose deposition in cell wall	IEP	HCCA
BP	GO:0060860	regulation of floral organ abscission	IEP	HCCA
BP	GO:0060862	negative regulation of floral organ abscission	IEP	HCCA
BP	GO:0060867	fruit abscission	IEP	HCCA
BP	GO:0071310	cellular response to organic substance	IEP	HCCA
BP	GO:0071365	cellular response to auxin stimulus	IEP	HCCA
BP	GO:0071495	cellular response to endogenous stimulus	IEP	HCCA
BP	GO:0080050	regulation of seed development	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2000028	regulation of photoperiodism, flowering	IEP	HCCA
BP	GO:2000034	regulation of seed maturation	IEP	HCCA
BP	GO:2000242	negative regulation of reproductive process	IEP	HCCA
BP	GO:2000692	negative regulation of seed maturation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	271	360
IPR003340	B3_DNA-bd	158	249
IPR003340	B3_DNA-bd	731	823
IPR003340	B3_DNA-bd	23	97
IPR003340	B3_DNA-bd	619	708
IPR003340	B3_DNA-bd	441	530

External Links

No external refs found!

AT1G26680

Expression Profile

Co-expression Networks

Functional Annotation