AT1G23550 (SRO2)

Aliases : SRO2

Description : similar to RCD one 2

Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G23550
Cluster	HCCA: Cluster_79

Target	Alias	Description	ECC score	Gene Family Method
Aob_g26676	AtRCD1, RCD1,...	organellar-signalling mediator *(RCD1) & original...	0.02	OrthoFinder output from all 47 species
Aop_g13070	SRO5	organellar-signalling mediator *(RCD1) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene39617.t1	AtRCD1, RCD1,...	organellar-signalling mediator *(RCD1) & original...	0.02	OrthoFinder output from all 47 species
Cba_g08763	SRO1	organellar-signalling mediator *(RCD1) & original...	0.03	OrthoFinder output from all 47 species
Cba_g27125	SRO1	organellar-signalling mediator *(RCD1) & original...	0.02	OrthoFinder output from all 47 species
Ceric.15G016700.1	AtRCD1, RCD1,...	organellar-signalling mediator *(RCD1) & original...	0.02	OrthoFinder output from all 47 species
Dde_g17490	SRO1	organellar-signalling mediator *(RCD1) & original...	0.02	OrthoFinder output from all 47 species
Pnu_g25860	AtRCD1, RCD1,...	organellar-signalling mediator *(RCD1) & original...	0.04	OrthoFinder output from all 47 species
Ppi_g01011	AtRCD1, RCD1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g12730	SRO1	organellar-signalling mediator *(RCD1) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009407	toxin catabolic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010583	response to cyclopentenone	RCA	Interproscan
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0098754	detoxification	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	HCCA
BP	GO:0009408	response to heat	IEP	HCCA
BP	GO:0009690	cytokinin metabolic process	IEP	HCCA
BP	GO:0034605	cellular response to heat	IEP	HCCA
BP	GO:0080148	negative regulation of response to water deprivation	IEP	HCCA
CC	GO:1903293	phosphatase complex	IEP	HCCA
BP	GO:2000070	regulation of response to water deprivation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022003	RST	251	316

External Links

No external refs found!