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  5. AT1G22250

AT1G22250


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78170.1); Has 64 Blast hits to 64 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G22250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00161690 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AT1G78170 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 OrthoFinder output from all 47 species
Aev_g02060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06979 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g23622 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g01453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02339 No alias regulatory protein *(CFL) of cutin and suberin... 0.02 OrthoFinder output from all 47 species
Als_g04681 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48908.t1 Aspi01Gene48908 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50293.t1 Aspi01Gene50293 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037205 No alias not classified & original description: CDS=1-378 0.06 OrthoFinder output from all 47 species
Azfi_s0277.g061498 No alias not classified & original description: CDS=447-1262 0.03 OrthoFinder output from all 47 species
Ceric.17G058000.1 Ceric.17G058000 not classified & original description: pacid=50617447... 0.04 OrthoFinder output from all 47 species
GSVIVT01013547001 No alias No description available 0.08 OrthoFinder output from all 47 species
LOC_Os02g31140.1 LOC_Os02g31140 CFL cutin and suberin biosynthesis regulator 0.05 OrthoFinder output from all 47 species
LOC_Os12g13100.1 LOC_Os12g13100 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g28612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24922 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_941055g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g02856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g074080.3.1 Solyc04g074080 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e014649_P001 Zm00001e014649 CFL cutin and suberin biosynthesis regulator 0.04 OrthoFinder output from all 47 species
Zm00001e038823_P001 Zm00001e038823 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!