AT1G21400

Description : Thiamin diphosphate-binding fold (THDP-binding) superfamily protein

Gene families : OG0004060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004060_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G21400
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001027.27	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.2...	0.01	OrthoFinder output from all 47 species
Cre12.g539900	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.2...	0.05	OrthoFinder output from all 47 species
GSVIVT01009978001	No alias	Amino acid metabolism.degradation.branched-chain amino...	0.03	OrthoFinder output from all 47 species
GSVIVT01026470001	No alias	Amino acid metabolism.degradation.branched-chain amino...	0.03	OrthoFinder output from all 47 species
Gb_05897	No alias	2-oxoisovalerate dehydrogenase subunit alpha 1,...	0.02	OrthoFinder output from all 47 species
LOC_Os12g08260.2	LOC_Os12g08260	subunit alpha of E1 2-oxoisovalerate dehydrogenase subcomplex	0.07	OrthoFinder output from all 47 species
MA_97571g0010	No alias	subunit alpha of E1 2-oxoisovalerate dehydrogenase subcomplex	0.02	OrthoFinder output from all 47 species
Mp5g05520.1	No alias	subunit alpha of E1 2-oxoisovalerate dehydrogenase subcomplex	0.05	OrthoFinder output from all 47 species
Sam_g12455	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo169956	No alias	Amino acid metabolism.degradation.branched-chain amino...	0.02	OrthoFinder output from all 47 species
Solyc04g063350.3.1	Solyc04g063350	subunit alpha of E1 2-oxoisovalerate dehydrogenase subcomplex	0.02	OrthoFinder output from all 47 species
Solyc05g056480.3.1	Solyc05g056480	subunit alpha of E1 2-oxoisovalerate dehydrogenase subcomplex	0.01	OrthoFinder output from all 47 species
Spa_g09872	No alias	EC_1.2 oxidoreductase acting on aldehyde or oxo group of...	0.03	OrthoFinder output from all 47 species
Zm00001e039575_P007	Zm00001e039575	subunit alpha of E1 2-oxoisovalerate dehydrogenase subcomplex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003863	3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	ISS	Interproscan
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009646	response to absence of light	IEP	Interproscan
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	None	Extended
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042594	response to starvation	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043617	cellular response to sucrose starvation	IEP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003868	4-hydroxyphenylpyruvate dioxygenase activity	IEP	HCCA
MF	GO:0003978	UDP-glucose 4-epimerase activity	IEP	HCCA
MF	GO:0003997	acyl-CoA oxidase activity	IEP	HCCA
MF	GO:0004028	3-chloroallyl aldehyde dehydrogenase activity	IEP	HCCA
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	HCCA
MF	GO:0004075	biotin carboxylase activity	IEP	HCCA
MF	GO:0004084	branched-chain-amino-acid transaminase activity	IEP	HCCA
MF	GO:0004089	carbonate dehydratase activity	IEP	HCCA
MF	GO:0004485	methylcrotonoyl-CoA carboxylase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004565	beta-galactosidase activity	IEP	HCCA
MF	GO:0004753	saccharopine dehydrogenase activity	IEP	HCCA
MF	GO:0004838	L-tyrosine:2-oxoglutarate aminotransferase activity	IEP	HCCA
MF	GO:0005275	amine transmembrane transporter activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
BP	GO:0006012	galactose metabolic process	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006528	asparagine metabolic process	IEP	HCCA
BP	GO:0006529	asparagine biosynthetic process	IEP	HCCA
BP	GO:0006551	leucine metabolic process	IEP	HCCA
BP	GO:0006552	leucine catabolic process	IEP	HCCA
BP	GO:0006553	lysine metabolic process	IEP	HCCA
BP	GO:0006554	lysine catabolic process	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006775	fat-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0007033	vacuole organization	IEP	HCCA
BP	GO:0007568	aging	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009063	amino acid catabolic process	IEP	HCCA
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	HCCA
BP	GO:0009068	aspartate family amino acid catabolic process	IEP	HCCA
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	HCCA
BP	GO:0009083	branched-chain amino acid catabolic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
BP	GO:0009746	response to hexose	IEP	HCCA
BP	GO:0009750	response to fructose	IEP	HCCA
BP	GO:0010189	vitamin E biosynthetic process	IEP	HCCA
BP	GO:0010236	plastoquinone biosynthetic process	IEP	HCCA
MF	GO:0015925	galactosidase activity	IEP	HCCA
BP	GO:0015976	carbon utilization	IEP	HCCA
BP	GO:0015996	chlorophyll catabolic process	IEP	HCCA
BP	GO:0016054	organic acid catabolic process	IEP	HCCA
MF	GO:0016421	CoA carboxylase activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	HCCA
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016854	racemase and epimerase activity	IEP	HCCA
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	HCCA
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	HCCA
BP	GO:0019477	L-lysine catabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
BP	GO:0033015	tetrapyrrole catabolic process	IEP	HCCA
BP	GO:0034284	response to monosaccharide	IEP	HCCA
BP	GO:0042181	ketone biosynthetic process	IEP	HCCA
BP	GO:0042360	vitamin E metabolic process	IEP	HCCA
BP	GO:0042362	fat-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046149	pigment catabolic process	IEP	HCCA
BP	GO:0046369	galactose biosynthetic process	IEP	HCCA
BP	GO:0046395	carboxylic acid catabolic process	IEP	HCCA
BP	GO:0046440	L-lysine metabolic process	IEP	HCCA
BP	GO:0046459	short-chain fatty acid metabolic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0047130	saccharopine dehydrogenase (NADP+, L-lysine-forming) activity	IEP	HCCA
MF	GO:0050373	UDP-arabinose 4-epimerase activity	IEP	HCCA
MF	GO:0050897	cobalt ion binding	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
MF	GO:0070547	L-tyrosine aminotransferase activity	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901606	alpha-amino acid catabolic process	IEP	HCCA
BP	GO:1901661	quinone metabolic process	IEP	HCCA
BP	GO:1901663	quinone biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001017	DH_E1	136	431

External Links

No external refs found!

AT1G21400

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation