AT1G21060

Description : Protein of unknown function, DUF547

Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G21060
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AT3G12540	No alias	Protein of unknown function, DUF547	0.03	OrthoFinder output from all 47 species
Als_g13551	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g21743	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g32260	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g11890	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0298.g063588	No alias	not classified & original description: CDS=837-2690	0.04	OrthoFinder output from all 47 species
Ceric.02G060000.1	Ceric.02G060000	not classified & original description: pacid=50584416...	0.04	OrthoFinder output from all 47 species
Ceric.14G094300.1	Ceric.14G094300	not classified & original description: pacid=50633652...	0.03	OrthoFinder output from all 47 species
Ceric.19G019200.1	Ceric.19G019200	not classified & original description: pacid=50576159...	0.02	OrthoFinder output from all 47 species
Dac_g13842	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g23842	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g37118	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g02699	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os07g03140.1	LOC_Os07g03140	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Len_g07477	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g13154	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Mp1g13540.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp1g27890.1	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Nbi_g03702	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g07704	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g22667	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0105.g020165	No alias	not classified & original description: CDS=1-2094	0.02	OrthoFinder output from all 47 species
Sam_g09691	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc04g079340.3.1	Solyc04g079340	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc06g008560.2.1	Solyc06g008560	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Spa_g14701	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g49986	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g45959	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e002322_P002	Zm00001e002322	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Zm00001e005808_P001	Zm00001e005808	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e009970_P005	Zm00001e009970	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e021904_P001	Zm00001e021904	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e034388_P001	Zm00001e034388	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005985	sucrose metabolic process	IEP	HCCA
BP	GO:0005986	sucrose biosynthetic process	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0050307	sucrose-phosphate phosphatase activity	IEP	HCCA
MF	GO:0050308	sugar-phosphatase activity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006869	DUF547	287	419
IPR025757	MIP1_Leuzipper	56	96

External Links

No external refs found!

AT1G21060

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation