AT1G17890 (GER2)

Aliases : GER2

Description : NAD(P)-binding Rossmann-fold superfamily protein

Gene families : OG0005165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005165_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G17890
Cluster	HCCA: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
Aev_g00860	GER2	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Ehy_g00753	ATFX, GER1	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Solyc07g006070.1.1	GER2, Solyc07g006070	GDP-L-fucose synthase	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006857	oligopeptide transport	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009225	nucleotide-sugar metabolic process	None	Extended
BP	GO:0009226	nucleotide-sugar biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0042350	GDP-L-fucose biosynthetic process	ISS	Interproscan
BP	GO:0042886	amide transport	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046368	GDP-L-fucose metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002679	respiratory burst involved in defense response	IEP	HCCA
MF	GO:0004151	dihydroorotase activity	IEP	HCCA
MF	GO:0004448	isocitrate dehydrogenase [NAD(P)+] activity	IEP	HCCA
MF	GO:0004449	isocitrate dehydrogenase (NAD+) activity	IEP	HCCA
MF	GO:0004656	procollagen-proline 4-dioxygenase activity	IEP	HCCA
MF	GO:0004791	thioredoxin-disulfide reductase activity	IEP	HCCA
CC	GO:0005746	mitochondrial respirasome	IEP	HCCA
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
CC	GO:0005768	endosome	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
CC	GO:0005802	trans-Golgi network	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0006102	isocitrate metabolic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009627	systemic acquired resistance	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009746	response to hexose	IEP	HCCA
BP	GO:0009749	response to glucose	IEP	HCCA
BP	GO:0009750	response to fructose	IEP	HCCA
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009788	negative regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009846	pollen germination	IEP	HCCA
BP	GO:0009853	photorespiration	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0009968	negative regulation of signal transduction	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010038	response to metal ion	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0010648	negative regulation of cell communication	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0016093	polyprenol metabolic process	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016487	farnesol metabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016668	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016812	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides	IEP	HCCA
BP	GO:0018126	protein hydroxylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019511	peptidyl-proline hydroxylation	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0019798	procollagen-proline dioxygenase activity	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0023057	negative regulation of signaling	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031410	cytoplasmic vesicle	IEP	HCCA
MF	GO:0031543	peptidyl-proline dioxygenase activity	IEP	HCCA
MF	GO:0031545	peptidyl-proline 4-dioxygenase activity	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
CC	GO:0031982	vesicle	IEP	HCCA
CC	GO:0031984	organelle subcompartment	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034284	response to monosaccharide	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0034308	primary alcohol metabolic process	IEP	HCCA
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042964	obsolete thioredoxin reduction	IEP	HCCA
BP	GO:0043090	amino acid import	IEP	HCCA
BP	GO:0043094	cellular metabolic compound salvage	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA
BP	GO:0045730	respiratory burst	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0047134	protein-disulfide reductase (NAD(P)) activity	IEP	HCCA
MF	GO:0047886	farnesol dehydrogenase activity	IEP	HCCA
BP	GO:0048316	seed development	IEP	HCCA
BP	GO:0048468	cell development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0048869	cellular developmental process	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
CC	GO:0070469	respirasome	IEP	HCCA
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0080129	proteasome core complex assembly	IEP	HCCA
BP	GO:0080147	root hair cell development	IEP	HCCA
CC	GO:0097708	intracellular vesicle	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0098791	Golgi apparatus subcompartment	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
BP	GO:1901419	regulation of response to alcohol	IEP	HCCA
BP	GO:1901420	negative regulation of response to alcohol	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
BP	GO:1902652	secondary alcohol metabolic process	IEP	HCCA
BP	GO:1905957	regulation of cellular response to alcohol	IEP	HCCA
BP	GO:1905958	negative regulation of cellular response to alcohol	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001509	Epimerase_deHydtase	22	253

External Links

No external refs found!

AT1G17890 (GER2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation