Aliases : UBP15
Description : ubiquitin-specific protease 15
Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT1G17110 | |
Cluster | HCCA: Cluster_6 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00135p00021060 | UBP16,... | Protein degradation.peptidase families.cysteine-type... | 0.04 | OrthoFinder output from all 47 species | |
Adi_g013897 | UBP25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g060737 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g069165 | UBP23 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g30011 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g13254 | UBP18 | deubiquitinase *(UBP15-21) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g01298 | UBP25 | deubiquitinase *(UBP25) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g07313 | UBP23 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.22G015900.1 | UBP25, Ceric.22G015900 | not classified & original description: pacid=50613832... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g26398 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g26924 | UBP25 | deubiquitinase *(UBP25) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g31799 | UBP19 | deubiquitinase *(UBP15-21) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01009158001 | UBP16 | Protein degradation.peptidase families.cysteine-type... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01013154001 | UBP20 | Protein degradation.peptidase families.cysteine-type... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01033166001 | UBP18 | Protein degradation.peptidase families.cysteine-type... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os09g28940.1 | UBP17, LOC_Os09g28940 | deubiquitinase (UBP15-21) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g11163 | UBP25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10429414g0020 | UBP18 | deubiquitinase (UBP15-21) | 0.04 | OrthoFinder output from all 47 species | |
Mp1g03220.1 | UBP25 | Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0182.g024898 | UBP23 | not classified & original description: CDS=166-2922 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g04367 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo420048 | UBP18 | Protein degradation.peptidase families.cysteine-type... | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g076210.3.1 | UBP16, Solyc04g076210 | deubiquitinase (UBP15-21) | 0.03 | OrthoFinder output from all 47 species | |
Tin_g12281 | UBP23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e022516_P001 | UBP17, Zm00001e022516 | deubiquitinase (UBP15-21) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e024878_P003 | UBP15, Zm00001e024878 | deubiquitinase (UBP15-21) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004843 | cysteine-type deubiquitinase activity | IDA | Interproscan |
MF | GO:0004843 | cysteine-type deubiquitinase activity | ISS | Interproscan |
CC | GO:0005576 | extracellular region | ISM | Interproscan |
CC | GO:0005634 | nucleus | IDA | Interproscan |
CC | GO:0005737 | cytoplasm | IDA | Interproscan |
BP | GO:0008283 | cell population proliferation | IMP | Interproscan |
BP | GO:0009908 | flower development | IMP | Interproscan |
BP | GO:0010154 | fruit development | IMP | Interproscan |
BP | GO:0016579 | protein deubiquitination | IDA | Interproscan |
BP | GO:0048364 | root development | IMP | Interproscan |
BP | GO:0048366 | leaf development | IMP | Interproscan |
BP | GO:0048367 | shoot system development | IMP | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000278 | mitotic cell cycle | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006346 | DNA methylation-dependent heterochromatin formation | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006497 | protein lipidation | IEP | HCCA |
BP | GO:0006498 | N-terminal protein lipidation | IEP | HCCA |
BP | GO:0006499 | N-terminal protein myristoylation | IEP | HCCA |
BP | GO:0007062 | sister chromatid cohesion | IEP | HCCA |
BP | GO:0007166 | cell surface receptor signaling pathway | IEP | HCCA |
BP | GO:0007167 | enzyme-linked receptor protein signaling pathway | IEP | HCCA |
BP | GO:0007169 | transmembrane receptor protein tyrosine kinase signaling pathway | IEP | HCCA |
BP | GO:0007267 | cell-cell signaling | IEP | HCCA |
MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | HCCA |
BP | GO:0009606 | tropism | IEP | HCCA |
BP | GO:0009616 | RNAi-mediated antiviral immune response | IEP | HCCA |
BP | GO:0009629 | response to gravity | IEP | HCCA |
BP | GO:0009630 | gravitropism | IEP | HCCA |
BP | GO:0009736 | cytokinin-activated signaling pathway | IEP | HCCA |
BP | GO:0009740 | gibberellic acid mediated signaling pathway | IEP | HCCA |
BP | GO:0009799 | specification of symmetry | IEP | HCCA |
BP | GO:0009855 | determination of bilateral symmetry | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0009937 | regulation of gibberellic acid mediated signaling pathway | IEP | HCCA |
BP | GO:0009938 | negative regulation of gibberellic acid mediated signaling pathway | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0009968 | negative regulation of signal transduction | IEP | HCCA |
BP | GO:0010014 | meristem initiation | IEP | HCCA |
BP | GO:0010050 | vegetative phase change | IEP | HCCA |
BP | GO:0010073 | meristem maintenance | IEP | HCCA |
BP | GO:0010267 | ta-siRNA processing | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010476 | gibberellin mediated signaling pathway | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
BP | GO:0010648 | negative regulation of cell communication | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016262 | protein N-acetylglucosaminyltransferase activity | IEP | HCCA |
BP | GO:0016441 | post-transcriptional gene silencing | IEP | HCCA |
BP | GO:0018377 | protein myristoylation | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0022402 | cell cycle process | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
BP | GO:0023052 | signaling | IEP | HCCA |
BP | GO:0023057 | negative regulation of signaling | IEP | HCCA |
BP | GO:0030422 | siRNA processing | IEP | HCCA |
BP | GO:0031365 | N-terminal protein amino acid modification | IEP | HCCA |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | HCCA |
BP | GO:0031507 | heterochromatin formation | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0035194 | RNA-mediated post-transcriptional gene silencing | IEP | HCCA |
BP | GO:0035196 | miRNA processing | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0040029 | epigenetic regulation of gene expression | IEP | HCCA |
BP | GO:0043687 | post-translational protein modification | IEP | HCCA |
BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0051607 | defense response to virus | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0070828 | heterochromatin organization | IEP | HCCA |
BP | GO:0070918 | regulatory ncRNA processing | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
CC | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | IEP | HCCA |
BP | GO:0140546 | defense response to symbiont | IEP | HCCA |
BP | GO:0140718 | facultative heterochromatin formation | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No external refs found! |