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  5. AT1G16230

AT1G16230


Description : Target SNARE coiled-coil domain protein


Gene families : OG0001545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G16230
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene13580.t1 ATSYP52, SYP52,... Qc-type SYP5-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
MA_5571g0010 ATSYP52, SYP52 SYP5 group Qc-type SNARE protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006638 neutral lipid metabolic process IEP HCCA
BP GO:0006639 acylglycerol metabolic process IEP HCCA
BP GO:0006641 triglyceride metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008970 phospholipase A1 activity IEP HCCA
BP GO:0010214 seed coat development IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0019433 triglyceride catabolic process IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0046461 neutral lipid catabolic process IEP HCCA
BP GO:0046464 acylglycerol catabolic process IEP HCCA
BP GO:0046503 glycerolipid catabolic process IEP HCCA
MF GO:0047714 galactolipase activity IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!