AT1G16070 (AtTLP8, TLP8)

Aliases : AtTLP8, TLP8

Description : tubby like protein 8

Gene families : OG0004261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004261_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G16070

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene46266.t1	AtTLP8, TLP8,...	TUB-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Azfi_s0198.g057394	AtTLP8, TLP8	TUB-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.03G003600.1	AtTLP8, TLP8,...	TUB-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g04627	AtTLP8, TLP8	TUB-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01016095001	AtTLP8, TLP8	RNA biosynthesis.transcriptional activation.TUB...	0.07	OrthoFinder output from all 47 species
Gb_10186	AtTLP8, TLP8	transcription factor (TUB)	0.06	OrthoFinder output from all 47 species
LOC_Os02g08310.1	AtTLP8, TLP8,...	transcription factor (TUB)	0.08	OrthoFinder output from all 47 species
Len_g01846	AtTLP8, TLP8	TUB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g15108	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_13250g0010	AtTLP8, TLP8	transcription factor (TUB)	0.04	OrthoFinder output from all 47 species
Msp_g14577	AtTLP8, TLP8	TUB-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g02347	AtTLP8, TLP8	TUB-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g10908	AtTLP8, TLP8	TUB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023802	AtTLP8, TLP8	TUB-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023948	AtTLP8, TLP8	TUB-type transcription factor & original description: CDS=1-1275	0.03	OrthoFinder output from all 47 species
Solyc03g117730.3.1	AtTLP8, TLP8,...	transcription factor (TUB)	0.12	OrthoFinder output from all 47 species
Spa_g00453	AtTLP8, TLP8	TUB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g55667	AtTLP8, TLP8	TUB-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e013819_P001	AtTLP8, TLP8,...	transcription factor (TUB)	0.12	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048443	stamen development	RCA	Interproscan
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	HCCA
BP	GO:0010440	stomatal lineage progression	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
MF	GO:0019207	kinase regulator activity	IEP	HCCA
MF	GO:0019887	protein kinase regulator activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
BP	GO:0031048	RNA-mediated heterochromatin formation	IEP	HCCA
BP	GO:0031507	heterochromatin formation	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
BP	GO:0040029	epigenetic regulation of gene expression	IEP	HCCA
BP	GO:0045814	negative regulation of gene expression, epigenetic	IEP	HCCA
BP	GO:0048449	floral organ formation	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051567	histone H3-K9 methylation	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0061647	histone H3-K9 modification	IEP	HCCA
BP	GO:0070828	heterochromatin organization	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
BP	GO:0140718	facultative heterochromatin formation	IEP	HCCA
BP	GO:1901987	regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000007	Tubby_C	151	391

External Links

No external refs found!

AT1G16070 (AtTLP8, TLP8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation