AT1G14320 (SAC52, RPL10, RPL10A)

Aliases : SAC52, RPL10, RPL10A

Description : Ribosomal protein L16p/L10e family protein

Gene families : OG0001847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001847_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G14320
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00072p00080890	RPL10B,...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	OrthoFinder output from all 47 species
AMTR_s00077p00151750	RPL10B,...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.12	OrthoFinder output from all 47 species
AT1G26910	RPL10B	Ribosomal protein L16p/L10e family protein	0.04	OrthoFinder output from all 47 species
Adi_g019250	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.13	OrthoFinder output from all 47 species
Aev_g35365	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Als_g26652	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Als_g51397	RPL10B	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g04834	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Aspi01Gene01249.t1	RPL10B, Aspi01Gene01249	component *(uL16) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Azfi_s0001.g000052	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.19	OrthoFinder output from all 47 species
Azfi_s0267.g061009	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Azfi_s1282.g100862	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Cba_g01654	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ceric.10G071500.1	RPL10B, Ceric.10G071500	component *(uL16) of large ribosomal-subunit (LSU)...	0.26	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001424.5	RPL10C, SAG24	Protein biosynthesis.cytosolic ribosome.large subunit...	0.24	OrthoFinder output from all 47 species
Dcu_g32912	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01001137001	RPL10B	60S ribosomal protein L10 OS=Vitis riparia	0.23	OrthoFinder output from all 47 species
GSVIVT01024537001	RPL10B	Protein biosynthesis.cytosolic ribosome.large subunit...	0.18	OrthoFinder output from all 47 species
Gb_06067	RPL10B	component RPL10 of LSU proteome component	0.28	OrthoFinder output from all 47 species
LOC_Os11g11390.1	RPL10B, LOC_Os11g11390	component RPL10 of LSU proteome component	0.13	OrthoFinder output from all 47 species
Len_g44753	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Lfl_g29877	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
MA_17326g0010	SAC52, RPL10, RPL10A	component RPL10 of LSU proteome component	0.32	OrthoFinder output from all 47 species
Mp4g23990.1	RPL10B	component RPL10 of LSU proteome component	0.41	OrthoFinder output from all 47 species
Msp_g21522	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Msp_g34193	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Nbi_g09642	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g10010	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Pir_g32123	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Pp3c11_4130V3.1	RPL10B, Pp3c11_4130	Ribosomal protein L16p/L10e family protein	0.21	OrthoFinder output from all 47 species
Pp3c2_29600V3.1	RPL10B, Pp3c2_29600	Ribosomal protein L16p/L10e family protein	0.28	OrthoFinder output from all 47 species
Pp3c7_22400V3.1	RPL10B, Pp3c7_22400	Ribosomal protein L16p/L10e family protein	0.22	OrthoFinder output from all 47 species
Ppi_g26211	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.12	OrthoFinder output from all 47 species
Ppi_g62311	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012273	RPL10B	not classified & original description: CDS=126-530	0.03	OrthoFinder output from all 47 species
Sam_g08903	No alias	component *(uL16) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Sam_g47361	No alias	component *(uL16) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Smo437527	RPL10B	Protein biosynthesis.cytosolic ribosome.large subunit...	0.12	OrthoFinder output from all 47 species
Solyc06g007520.4.1	RPL10B, Solyc06g007520	component RPL10 of LSU proteome component	0.45	OrthoFinder output from all 47 species
Solyc06g082650.4.1	SAC52, RPL10,...	component RPL10 of LSU proteome component	0.47	OrthoFinder output from all 47 species
Solyc06g082670.3.1	RPL10B, Solyc06g082670	component RPL10 of LSU proteome component	0.34	OrthoFinder output from all 47 species
Spa_g18494	RPL10B	component *(uL16) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Spa_g51059	RPL10C, SAG24	component *(uL16) of large ribosomal-subunit (LSU)...	0.2	OrthoFinder output from all 47 species
Zm00001e004933_P001	RPL10B, Zm00001e004933	component RPL10 of LSU proteome component	0.15	OrthoFinder output from all 47 species
Zm00001e012474_P002	RPL10C, SAG24,...	component RPL10 of LSU proteome component	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	ISS	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005730	nucleolus	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005840	ribosome	IPI	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006412	translation	ISS	Interproscan
BP	GO:0006412	translation	TAS	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009451	RNA modification	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010224	response to UV-B	None	Extended
CC	GO:0015934	large ribosomal subunit	ISS	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0022625	cytosolic large ribosomal subunit	IDA	Interproscan
CC	GO:0022626	cytosolic ribosome	IDA	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032502	developmental process	IMP	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034644	cellular response to UV	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071493	cellular response to UV-B	IMP	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000028	ribosomal small subunit assembly	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	HCCA
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0010229	inflorescence development	IEP	HCCA
CC	GO:0015935	small ribosomal subunit	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	HCCA
CC	GO:0022627	cytosolic small ribosomal subunit	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0042991	obsolete transcription factor import into nucleus	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0048438	floral whorl development	IEP	HCCA
BP	GO:0048467	gynoecium development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016180	Ribosomal_L10e/L16	13	166

External Links

No external refs found!

AT1G14320 (SAC52, RPL10, RPL10A)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation