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  5. AT1G13500

AT1G13500


Description : Protein of unknown function (DUF1262)


Gene families : OG0008988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G13500

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00054060 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00088p00061690 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00061760 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00063810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G13470 No alias Protein of unknown function (DUF1262) 0.03 OrthoFinder output from all 47 species
AT1G13480 No alias Protein of unknown function (DUF1262) 0.04 OrthoFinder output from all 47 species
AT1G13490 No alias Protein of unknown function (DUF1262) 0.05 OrthoFinder output from all 47 species
AT1G13520 No alias Protein of unknown function (DUF1262) 0.1 OrthoFinder output from all 47 species
AT1G13540 No alias Protein of unknown function (DUF1262) 0.07 OrthoFinder output from all 47 species
AT1G13550 No alias Protein of unknown function (DUF1262) 0.06 OrthoFinder output from all 47 species
GSVIVT01012026001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_01792 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_22146 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g31860.1 LOC_Os08g31860 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g31890.1 LOC_Os08g31890 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g010460.4.1 Solyc05g010460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e022372_P001 Zm00001e022372 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR010683 DUF1262 23 121
No external refs found!