AT1G13300 (HRS1)

Aliases : HRS1

Description : myb-like transcription factor family protein

Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G13300

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00122p00127250	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
AT2G03500	No alias	Homeodomain-like superfamily protein	0.09	OrthoFinder output from all 47 species
Adi_g019107	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g030747	No alias	GARP subgroup HHO transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g37049	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ala_g23352	No alias	GARP subgroup HHO transcription factor & original...	0.04	OrthoFinder output from all 47 species
Als_g15773	No alias	GARP subgroup HHO transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aob_g02230	No alias	GARP subgroup HHO transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aob_g06618	No alias	GARP subgroup HHO transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aob_g27276	No alias	GARP subgroup HHO transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aob_g30627	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g22464	No alias	GARP subgroup HHO transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.38G044700.1	Ceric.38G044700	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g03915	No alias	GARP subgroup HHO transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dcu_g16223	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g31861	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g02562	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01015462001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
LOC_Os01g08160.1	LOC_Os01g08160	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
Lfl_g03258	No alias	GARP subgroup HHO transcription factor & original...	0.02	OrthoFinder output from all 47 species
MA_541749g0010	No alias	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
Ore_g04223	No alias	GARP subgroup HHO transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g33222	No alias	GARP subgroup HHO transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pir_g14104	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g26211	No alias	transcriptional repressor *(NIGT) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g05162	No alias	GARP subgroup HHO transcription factor & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0185.g025023	No alias	GARP subgroup HHO transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sam_g29341	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g37435	No alias	GARP subgroup HHO transcription factor & original...	0.03	OrthoFinder output from all 47 species
Smo402040	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
Solyc12g006800.2.1	Solyc12g006800	G2-like GARP transcription factor	0.04	OrthoFinder output from all 47 species
Tin_g05995	No alias	GARP subgroup HHO transcription factor & original...	0.04	OrthoFinder output from all 47 species
Tin_g11367	No alias	GARP subgroup HHO transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e016724_P001	Zm00001e016724	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016036	cellular response to phosphate starvation	IMP	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042594	response to starvation	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0080022	primary root development	IMP	Interproscan
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001763	morphogenesis of a branching structure	IEP	HCCA
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005242	inward rectifier potassium channel activity	IEP	HCCA
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005249	voltage-gated potassium channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
MF	GO:0005267	potassium channel activity	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009690	cytokinin metabolic process	IEP	HCCA
BP	GO:0009691	cytokinin biosynthetic process	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0010311	lateral root formation	IEP	HCCA
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	HCCA
BP	GO:0010410	hemicellulose metabolic process	IEP	HCCA
BP	GO:0010413	glucuronoxylan metabolic process	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
BP	GO:0015695	organic cation transport	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
BP	GO:0019722	calcium-mediated signaling	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022832	voltage-gated channel activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022843	voltage-gated monoatomic cation channel activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0030551	cyclic nucleotide binding	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042445	hormone metabolic process	IEP	HCCA
BP	GO:0042446	hormone biosynthetic process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
BP	GO:0045491	xylan metabolic process	IEP	HCCA
BP	GO:0045492	xylan biosynthetic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
MF	GO:0050284	sinapate 1-glucosyltransferase activity	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	HCCA
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0080181	lateral root branching	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
MF	GO:0099094	ligand-gated monoatomic cation channel activity	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G13300 (HRS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation