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Description : BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT1G61080.1); Has 579 Blast hits to 567 proteins in 152 species: Archae - 0; Bacteria - 68; Metazoa - 159; Fungi - 113; Plants - 172; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Gene families : OG0002918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002918_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g31499 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g50127 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g13418 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g00785 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03543 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g09707 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene03298.t1 | Aspi01Gene03298 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14544 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G065600.1 | Ceric.06G065600 | not classified & original description: pacid=50619785... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.16G012800.1 | Ceric.16G012800 | not classified & original description: pacid=50590071... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.34G023900.1 | Ceric.34G023900 | not classified & original description: pacid=50622927... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007118001 | No alias | Uncharacterized protein At4g04980 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Len_g28678 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g59211 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g16488 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g02486 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14991 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05879 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g20616 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18065 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01327 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g56810 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07985 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24886 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12627 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g51001 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g54907 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05626 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003825 | alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | IEP | HCCA |
| MF | GO:0005217 | intracellular ligand-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005385 | zinc ion transmembrane transporter activity | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0006829 | zinc ion transport | IEP | HCCA |
| BP | GO:0006874 | cellular calcium ion homeostasis | IEP | HCCA |
| BP | GO:0009299 | mRNA transcription | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0009624 | response to nematode | IEP | HCCA |
| BP | GO:0010101 | post-embryonic root morphogenesis | IEP | HCCA |
| BP | GO:0010102 | lateral root morphogenesis | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
| CC | GO:0031351 | obsolete integral component of plastid membrane | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0055074 | calcium ion homeostasis | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |