AT1G10830 (Z-ISO1.1, Z-ISO, Z-ISO1.2)

Aliases : Z-ISO1.1, Z-ISO, Z-ISO1.2

Description : 15-cis-zeta-carotene isomerase

Gene families : OG0007329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007329_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G10830
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
Ala_g01482	Z-ISO1.1, Z-ISO, Z-ISO1.2	zeta-carotene isomerase *(Z-ISO) & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001629.4	Z-ISO1.1, Z-ISO, Z-ISO1.2	Secondary metabolism.terpenoids.terpenoid...	0.01	OrthoFinder output from all 47 species
Mp2g21230.1	Z-ISO1.1, Z-ISO, Z-ISO1.2	zeta-carotene isomerase (Z-ISO)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016119	carotene metabolic process	None	Extended
BP	GO:0016120	carotene biosynthetic process	IMP	Interproscan
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	None	Extended
BP	GO:0042214	terpene metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0046246	terpene biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090471	9,15,9'-tri-cis-zeta-carotene isomerase activity	IDA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120251	hydrocarbon biosynthetic process	None	Extended
BP	GO:0120252	hydrocarbon metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IEP	HCCA
BP	GO:0001887	selenium compound metabolic process	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006771	riboflavin metabolic process	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
MF	GO:0008835	diaminohydroxyphosphoribosylaminopyrimidine deaminase activity	IEP	HCCA
MF	GO:0009000	selenocysteine lyase activity	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009231	riboflavin biosynthetic process	IEP	HCCA
CC	GO:0009535	chloroplast thylakoid membrane	IEP	HCCA
BP	GO:0010039	response to iron ion	IEP	HCCA
BP	GO:0010269	response to selenium ion	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	HCCA
MF	GO:0016783	sulfurtransferase activity	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016846	carbon-sulfur lyase activity	IEP	HCCA
BP	GO:0018282	metal incorporation into metallo-sulfur cluster	IEP	HCCA
BP	GO:0018283	iron incorporation into metallo-sulfur cluster	IEP	HCCA
MF	GO:0019239	deaminase activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
MF	GO:0031071	cysteine desulfurase activity	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
CC	GO:0042170	plastid membrane	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
BP	GO:0042726	flavin-containing compound metabolic process	IEP	HCCA
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
BP	GO:0050801	monoatomic ion homeostasis	IEP	HCCA
CC	GO:0055035	plastid thylakoid membrane	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055072	iron ion homeostasis	IEP	HCCA
BP	GO:0055076	transition metal ion homeostasis	IEP	HCCA
BP	GO:0055080	monoatomic cation homeostasis	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR009915	NnrU_dom	140	361

External Links

No external refs found!

AT1G10830 (Z-ISO1.1, Z-ISO, Z-ISO1.2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation