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  5. AT1G09250

AT1G09250


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0000875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G09250

Target Alias Description ECC score Gene Family Method Actions
Aev_g42814 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37001 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18708 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06065 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g20497 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Gb_11451 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os04g56500.1 LOC_Os04g56500 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
LOC_Os09g20940.1 LOC_Os09g20940 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
MA_102253g0010 No alias transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
MA_209740g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_31099g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_40267g0020 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_66021g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_695114g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Msp_g05867 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g100660.4.1 Solyc01g100660 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc07g056360.1.1 PAR1, HLH1,... transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e023717_P001 Zm00001e023717 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e025908_P001 AIF1, Zm00001e025908 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA

No InterPro domains available for this sequence

No external refs found!