AT1G08770 (PRA1.E)

Aliases : PRA1.E

Description : prenylated RAB acceptor 1.E

Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G08770
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AT4G29658	PRA1.C	prenylated RAB acceptor 1.C	0.02	OrthoFinder output from all 47 species
Ehy_g07333	PRA1.B3	B-G-class Rab-GDF protein & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g04246	PRA1.B4	B-G-class Rab-GDF protein & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g03073	PRA1.B5	B-G-class Rab-GDF protein & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0016192	vesicle-mediated transport	IDA	Interproscan
BP	GO:0016192	vesicle-mediated transport	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006623	protein targeting to vacuole	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
BP	GO:0019321	pentose metabolic process	IEP	HCCA
MF	GO:0032451	demethylase activity	IEP	HCCA
MF	GO:0032452	histone demethylase activity	IEP	HCCA
MF	GO:0032453	histone H3K4 demethylase activity	IEP	HCCA
BP	GO:0042732	D-xylose metabolic process	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0072665	protein localization to vacuole	IEP	HCCA
BP	GO:0072666	establishment of protein localization to vacuole	IEP	HCCA
MF	GO:0140457	protein demethylase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004895	Prenylated_rab_accept_PRA1	44	186

External Links

No external refs found!