Aliases : WIP3
Description : WIP domain protein 3
Gene families : OG0001814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001814_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT1G08290 | |
Cluster | HCCA: Cluster_57 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g05354 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g29352 | WIP4 | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.24G008900.1 | WIP2, NTT,... | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g06863 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g06979 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01009046001 | TT1, WIP1 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01033329001 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os05g37190.1 | WIP5, LOC_Os05g37190 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
Smo110681 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g074360.4.1 | WIP3, Solyc06g074360 | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e003504_P001 | WIP2, NTT, Zm00001e003504 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e024373_P001 | WIP2, NTT, Zm00001e024373 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e026959_P001 | WIP5, Zm00001e026959 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | ISS | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
CC | GO:0005634 | nucleus | IDA | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | TAS | Interproscan |
MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | HCCA |
MF | GO:0004871 | obsolete signal transducer activity | IEP | HCCA |
CC | GO:0005886 | plasma membrane | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006855 | xenobiotic transmembrane transport | IEP | HCCA |
BP | GO:0006995 | cellular response to nitrogen starvation | IEP | HCCA |
BP | GO:0007155 | cell adhesion | IEP | HCCA |
BP | GO:0007166 | cell surface receptor signaling pathway | IEP | HCCA |
BP | GO:0007167 | enzyme-linked receptor protein signaling pathway | IEP | HCCA |
BP | GO:0007169 | transmembrane receptor protein tyrosine kinase signaling pathway | IEP | HCCA |
BP | GO:0007389 | pattern specification process | IEP | HCCA |
BP | GO:0008219 | cell death | IEP | HCCA |
BP | GO:0009051 | pentose-phosphate shunt, oxidative branch | IEP | HCCA |
BP | GO:0009690 | cytokinin metabolic process | IEP | HCCA |
BP | GO:0009691 | cytokinin biosynthetic process | IEP | HCCA |
BP | GO:0009799 | specification of symmetry | IEP | HCCA |
BP | GO:0009855 | determination of bilateral symmetry | IEP | HCCA |
BP | GO:0009887 | animal organ morphogenesis | IEP | HCCA |
BP | GO:0009888 | tissue development | IEP | HCCA |
BP | GO:0009944 | polarity specification of adaxial/abaxial axis | IEP | HCCA |
BP | GO:0009953 | dorsal/ventral pattern formation | IEP | HCCA |
BP | GO:0009962 | regulation of flavonoid biosynthetic process | IEP | HCCA |
BP | GO:0009963 | positive regulation of flavonoid biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010014 | meristem initiation | IEP | HCCA |
BP | GO:0010016 | shoot system morphogenesis | IEP | HCCA |
BP | GO:0010051 | xylem and phloem pattern formation | IEP | HCCA |
BP | GO:0010073 | meristem maintenance | IEP | HCCA |
BP | GO:0010075 | regulation of meristem growth | IEP | HCCA |
BP | GO:0010087 | phloem or xylem histogenesis | IEP | HCCA |
BP | GO:0010089 | xylem development | IEP | HCCA |
BP | GO:0010090 | trichome morphogenesis | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
BP | GO:0032502 | developmental process | IEP | HCCA |
BP | GO:0040008 | regulation of growth | IEP | HCCA |
BP | GO:0042908 | xenobiotic transport | IEP | HCCA |
BP | GO:0043562 | cellular response to nitrogen levels | IEP | HCCA |
BP | GO:0045010 | actin nucleation | IEP | HCCA |
BP | GO:0045927 | positive regulation of growth | IEP | HCCA |
BP | GO:0048263 | determination of dorsal identity | IEP | HCCA |
BP | GO:0048439 | flower morphogenesis | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048638 | regulation of developmental growth | IEP | HCCA |
BP | GO:0048856 | anatomical structure development | IEP | HCCA |
BP | GO:0050793 | regulation of developmental process | IEP | HCCA |
BP | GO:0065001 | specification of axis polarity | IEP | HCCA |
BP | GO:0080060 | integument development | IEP | HCCA |
BP | GO:2000603 | regulation of secondary growth | IEP | HCCA |
BP | GO:2000605 | positive regulation of secondary growth | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |