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  5. AT1G07820

AT1G07820


Description : Histone superfamily protein


Gene families : OG0000254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G07820

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271490 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
AMTR_s00003p00201000 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from all 47 species
Adi_g006378 No alias histone *(H4) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g013645 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013963 No alias histone *(H4) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g068069 No alias histone *(H4) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g072655 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g128464 No alias histone *(H4) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g31946 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06073 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17108.t1 Aspi01Gene17108 histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G005700.1 Ceric.05G005700 histone *(H4) & original description: pacid=50578064... 0.04 OrthoFinder output from all 47 species
Ceric.11G079500.1 Ceric.11G079500 histone *(H4) & original description: pacid=50595239... 0.08 OrthoFinder output from all 47 species
Ceric.12G062500.1 Ceric.12G062500 histone *(H4) & original description: pacid=50600733... 0.05 OrthoFinder output from all 47 species
Ceric.12G065600.1 Ceric.12G065600 histone *(H4) & original description: pacid=50601973... 0.09 OrthoFinder output from all 47 species
Ceric.12G065700.1 Ceric.12G065700 histone *(H4) & original description: pacid=50601214... 0.13 OrthoFinder output from all 47 species
Ceric.12G080900.1 Ceric.12G080900 histone *(H4) & original description: pacid=50601464... 0.13 OrthoFinder output from all 47 species
Ceric.12G081100.1 Ceric.12G081100 histone *(H4) & original description: pacid=50601273... 0.07 OrthoFinder output from all 47 species
Ceric.14G089900.1 Ceric.14G089900 histone *(H4) & original description: pacid=50633501... 0.12 OrthoFinder output from all 47 species
Ceric.28G045100.1 Ceric.28G045100 histone *(H4) & original description: pacid=50570632... 0.08 OrthoFinder output from all 47 species
Ceric.28G048800.1 Ceric.28G048800 histone *(H4) & original description: pacid=50569578... 0.04 OrthoFinder output from all 47 species
Ceric.29G054900.1 Ceric.29G054900 histone *(H4) & original description: pacid=50625709... 0.06 OrthoFinder output from all 47 species
Ceric.29G055000.1 Ceric.29G055000 histone *(H4) & original description: pacid=50624348... 0.11 OrthoFinder output from all 47 species
Ceric.38G017000.1 Ceric.38G017000 histone *(H4) & original description: pacid=50580621... 0.13 OrthoFinder output from all 47 species
Cre06.g264600 No alias Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder output from all 47 species
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.13 OrthoFinder output from all 47 species
Cre06.g265200 No alias Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder output from all 47 species
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.13 OrthoFinder output from all 47 species
Cre06.g266600 No alias Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder output from all 47 species
Cre06.g268000 No alias Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder output from all 47 species
Cre06.g268400 No alias Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder output from all 47 species
Cre06.g271300 No alias Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder output from all 47 species
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.13 OrthoFinder output from all 47 species
Cre06.g274300 No alias Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder output from all 47 species
Cre06.g274900 No alias Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder output from all 47 species
Cre06.g275700 No alias Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder output from all 47 species
Cre06.g276650 No alias Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder output from all 47 species
Cre06.g276800 No alias Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder output from all 47 species
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.14 OrthoFinder output from all 47 species
Cre12.g504850 No alias Chromatin organisation.histones.H4-type histone 0.12 OrthoFinder output from all 47 species
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.14 OrthoFinder output from all 47 species
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.13 OrthoFinder output from all 47 species
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.14 OrthoFinder output from all 47 species
Cre17.g708200 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708650 No alias Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder output from all 47 species
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.12 OrthoFinder output from all 47 species
Dac_g11115 No alias histone *(H4) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01016578001 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from all 47 species
GSVIVT01034208001 No alias Chromatin organisation.histones.H4-type histone 0.08 OrthoFinder output from all 47 species
Gb_10373 No alias histone (H4) 0.06 OrthoFinder output from all 47 species
Gb_10374 No alias histone (H4) 0.08 OrthoFinder output from all 47 species
Gb_15454 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
Gb_15455 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Gb_15458 No alias histone (H4) 0.06 OrthoFinder output from all 47 species
Gb_15459 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Gb_21914 No alias histone (H4) 0.07 OrthoFinder output from all 47 species
Gb_21918 No alias histone (H4) 0.08 OrthoFinder output from all 47 species
Gb_25031 No alias histone (H4) 0.08 OrthoFinder output from all 47 species
Gb_28215 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
LOC_Os01g61920.1 LOC_Os01g61920 histone (H4) 0.08 OrthoFinder output from all 47 species
LOC_Os02g45940.1 LOC_Os02g45940 histone (H4) 0.09 OrthoFinder output from all 47 species
LOC_Os03g02780.1 LOC_Os03g02780 histone (H4) 0.08 OrthoFinder output from all 47 species
LOC_Os04g49420.1 LOC_Os04g49420 histone (H4) 0.03 OrthoFinder output from all 47 species
LOC_Os05g38740.1 LOC_Os05g38740 histone (H4) 0.04 OrthoFinder output from all 47 species
LOC_Os05g39050.1 LOC_Os05g39050 histone (H4) 0.1 OrthoFinder output from all 47 species
LOC_Os07g36500.1 LOC_Os07g36500 histone (H4) 0.1 OrthoFinder output from all 47 species
LOC_Os09g26340.1 LOC_Os09g26340 histone (H4) 0.08 OrthoFinder output from all 47 species
LOC_Os09g38020.1 LOC_Os09g38020 histone (H4) 0.1 OrthoFinder output from all 47 species
LOC_Os10g39410.1 LOC_Os10g39410 histone (H4) 0.03 OrthoFinder output from all 47 species
Len_g03946 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g55897 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427181g0010 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
MA_10428142g0010 No alias histone (H4) 0.08 OrthoFinder output from all 47 species
MA_10433778g0010 No alias histone (H4) 0.11 OrthoFinder output from all 47 species
MA_116904g0010 No alias histone (H4) 0.09 OrthoFinder output from all 47 species
MA_141877g0030 No alias histone (H4) 0.06 OrthoFinder output from all 47 species
MA_234535g0010 No alias histone (H4) 0.06 OrthoFinder output from all 47 species
MA_465285g0010 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
MA_713159g0010 No alias histone (H4) 0.11 OrthoFinder output from all 47 species
MA_73436g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_74102g0010 No alias histone (H4) 0.09 OrthoFinder output from all 47 species
MA_83574g0010 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
MA_89764g0010 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
MA_97951g0010 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
Mp4g03090.1 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
Mp4g13440.1 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Mp5g16840.1 No alias histone (H4) 0.12 OrthoFinder output from all 47 species
Mp5g22460.1 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Mp5g22470.1 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Pir_g47700 No alias histone *(H4) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c22_22340V3.1 Pp3c22_22340 histone H4 0.03 OrthoFinder output from all 47 species
Pp3c4_22160V3.1 Pp3c4_22160 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c7_22150V3.1 Pp3c7_22150 histone H4 0.03 OrthoFinder output from all 47 species
Ppi_g59171 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06107 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38432 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Smo150847 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Smo167497 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Smo233579 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Solyc04g011390.1.1 Solyc04g011390 histone (H4) 0.15 OrthoFinder output from all 47 species
Solyc05g054610.1.1 Solyc05g054610 histone (H4) 0.1 OrthoFinder output from all 47 species
Solyc06g005420.1.1 Solyc06g005420 histone (H4) 0.12 OrthoFinder output from all 47 species
Solyc06g005430.1.1 Solyc06g005430 histone (H4) 0.1 OrthoFinder output from all 47 species
Solyc06g072240.1.1 Solyc06g072240 histone (H4) 0.06 OrthoFinder output from all 47 species
Solyc06g075830.2.1 Solyc06g075830 histone (H4) 0.12 OrthoFinder output from all 47 species
Solyc06g075850.1.1 Solyc06g075850 histone (H4) 0.05 OrthoFinder output from all 47 species
Solyc06g075930.1.1 Solyc06g075930 histone (H4) 0.07 OrthoFinder output from all 47 species
Solyc06g075960.1.1 Solyc06g075960 histone (H4) 0.15 OrthoFinder output from all 47 species
Solyc11g066160.1.1 Solyc11g066160 histone (H4) 0.13 OrthoFinder output from all 47 species
Solyc11g072840.1.1 Solyc11g072840 histone (H4) 0.07 OrthoFinder output from all 47 species
Solyc11g072860.2.1 Solyc11g072860 histone (H4) 0.06 OrthoFinder output from all 47 species
Spa_g35494 No alias histone *(H4) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g53626 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03600 No alias histone *(H4) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g42771 No alias histone *(H4) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007138_P001 Zm00001e007138 histone (H4) 0.07 OrthoFinder output from all 47 species
Zm00001e009859_P001 Zm00001e009859 histone (H4) 0.13 OrthoFinder output from all 47 species
Zm00001e016816_P001 Zm00001e016816 histone (H4) 0.1 OrthoFinder output from all 47 species
Zm00001e019368_P001 Zm00001e019368 histone (H4) 0.07 OrthoFinder output from all 47 species
Zm00001e023245_P001 Zm00001e023245 histone (H4) 0.06 OrthoFinder output from all 47 species
Zm00001e025845_P001 Zm00001e025845 histone (H4) 0.08 OrthoFinder output from all 47 species
Zm00001e027269_P001 Zm00001e027269 histone (H4) 0.04 OrthoFinder output from all 47 species
Zm00001e034229_P001 Zm00001e034229 histone (H4) 0.1 OrthoFinder output from all 47 species
Zm00001e034230_P001 Zm00001e034230 histone (H4) 0.06 OrthoFinder output from all 47 species
Zm00001e034964_P001 Zm00001e034964 histone (H4) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0022403 cell cycle phase IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0044848 biological phase IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051322 anaphase IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
CC GO:0055028 cortical microtubule IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
CC GO:0072686 mitotic spindle IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!