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  5. AT1G07540

AT1G07540 (TRFL2)


Aliases : TRFL2

Description : TRF-like 2


Gene families : OG0001380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G07540
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Aob_g14353 TRFL9, ATTBP2 telomeric dsDNA-binding protein & original description: none 0.02 OrthoFinder output from all 47 species
Gb_10303 TRFL2 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Msp_g15747 TRFL2 telomeric dsDNA-binding protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47701 TRFL2 telomeric dsDNA-binding protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0001676 long-chain fatty acid metabolic process IEP HCCA
BP GO:0002213 defense response to insect IEP HCCA
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008553 P-type proton-exporting transporter activity IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015645 fatty acid ligase activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016405 CoA-ligase activity IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016878 acid-thiol ligase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!