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  5. AT1G04780

AT1G04780


Description : Ankyrin repeat family protein


Gene families : OG0000611 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000611_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G04780
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Adi_g008507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082838 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g48712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G053900.1 Ceric.14G053900 not classified & original description: pacid=50633101... 0.03 OrthoFinder output from all 47 species
Ceric.16G079000.1 Ceric.16G079000 not classified & original description: pacid=50589613... 0.03 OrthoFinder output from all 47 species
Ehy_g09995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11112 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435151g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g13059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30085 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011149 No alias not classified & original description: CDS=646-3039 0.03 OrthoFinder output from all 47 species
Sam_g12437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05609 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP HCCA
CC GO:0000793 condensed chromosome IEP HCCA
CC GO:0000794 condensed nuclear chromosome IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006580 ethanolamine metabolic process IEP HCCA
BP GO:0006617 SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010265 SCF complex assembly IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0032104 regulation of response to extracellular stimulus IEP HCCA
BP GO:0032107 regulation of response to nutrient levels IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034599 cellular response to oxidative stress IEP HCCA
BP GO:0034614 cellular response to reactive oxygen species IEP HCCA
BP GO:0035725 sodium ion transmembrane transport IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042439 ethanolamine-containing compound metabolic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043620 regulation of DNA-templated transcription in response to stress IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
MF GO:0051139 metal cation:proton antiporter activity IEP HCCA
MF GO:0052638 indole-3-butyrate beta-glucosyltransferase activity IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070301 cellular response to hydrogen peroxide IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071215 cellular response to abscisic acid stimulus IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071396 cellular response to lipid IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
BP GO:0071474 cellular hyperosmotic response IEP HCCA
BP GO:0071475 cellular hyperosmotic salinity response IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080024 indolebutyric acid metabolic process IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0097306 cellular response to alcohol IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:0098754 detoxification IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1901160 primary amino compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR021832 ANKRD13 188 638
No external refs found!