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AT1G04610 (YUC3)


Aliases : YUC3

Description : YUCCA 3


Gene families : OG0000787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000787_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G04610

Target Alias Description ECC score Gene Family Method Actions
AT4G32540 YUC, YUC1 Flavin-binding monooxygenase family protein 0.02 OrthoFinder output from all 47 species
Ceric.07G071400.1 YUC9, Ceric.07G071400 flavin-dependent monooxygenase *(YUCCA) & original... 0.03 OrthoFinder output from all 47 species
Dac_g02209 YUC5, SUPER1 flavin-dependent monooxygenase *(YUCCA) & original... 0.03 OrthoFinder output from all 47 species
Dac_g14944 YUC9 flavin-dependent monooxygenase *(YUCCA) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01028991001 YUC3 Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.03 OrthoFinder output from all 47 species
LOC_Os01g45760.1 YUC4, LOC_Os01g45760 flavin monooxygenase (YUCCA) 0.03 OrthoFinder output from all 47 species
LOC_Os04g03980.1 YUC5, SUPER1,... flavin monooxygenase (YUCCA) 0.03 OrthoFinder output from all 47 species
Len_g15909 YUC8 flavin-dependent monooxygenase *(YUCCA) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e008767_P001 YUC5, SUPER1,... flavin monooxygenase (YUCCA) 0.02 OrthoFinder output from all 47 species
Zm00001e009691_P002 YUC9, Zm00001e009691 flavin monooxygenase (YUCCA) 0.03 OrthoFinder output from all 47 species
Zm00001e020334_P001 YUC4, Zm00001e020334 flavin monooxygenase (YUCCA) 0.03 OrthoFinder output from all 47 species
Zm00001e038355_P001 YUC9, Zm00001e038355 flavin monooxygenase (YUCCA) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009851 auxin biosynthetic process IMP Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004708 MAP kinase kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009403 toxin biosynthetic process IEP HCCA
BP GO:0009700 indole phytoalexin biosynthetic process IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010120 camalexin biosynthetic process IEP HCCA
BP GO:0010262 somatic embryogenesis IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019209 kinase activator activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030295 protein kinase activator activity IEP HCCA
BP GO:0031099 regeneration IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0046217 indole phytoalexin metabolic process IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0052314 phytoalexin metabolic process IEP HCCA
BP GO:0052315 phytoalexin biosynthetic process IEP HCCA
BP GO:0052317 camalexin metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR020946 Flavin_mOase-like 39 358
No external refs found!