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  5. AT1G04050

AT1G04050 (SDG13, SUVR1)


Aliases : SDG13, SUVR1

Description : homolog of SU(var)3-9 1


Gene families : OG0002277 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G04050
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AT5G43990 SDG18, SUVR2 SET-domain containing protein lysine methyltransferase... 0.03 OrthoFinder output from all 47 species
Ala_g35333 SUVR4, SDG31 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ore_g18271 SUVR4, SDG31 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Solyc06g083760.3.1 SDG18, SUVR2,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Zm00001e003847_P002 SUVR4, SDG31,... class V/Su(var) histone methyltransferase component of... 0.04 OrthoFinder output from all 47 species
Zm00001e022012_P001 SUVR4, SDG31,... class V/Su(var) histone methyltransferase component of... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005730 nucleolus IDA Interproscan
BP GO:0009855 determination of bilateral symmetry RCA Interproscan
BP GO:0009887 animal organ morphogenesis RCA Interproscan
BP GO:0010051 xylem and phloem pattern formation RCA Interproscan
BP GO:0048439 flower morphogenesis RCA Interproscan
BP GO:0048451 petal formation RCA Interproscan
BP GO:0048453 sepal formation RCA Interproscan
BP GO:0048519 negative regulation of biological process RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0009615 response to virus IEP HCCA
MF GO:0035197 siRNA binding IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
MF GO:0061980 regulatory RNA binding IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 578 696
IPR018848 WIYLD_domain 6 59
IPR007728 Pre-SET_dom 410 558
No external refs found!