AT1G03840 (MGP)

Aliases : MGP

Description : C2H2 and C2HC zinc fingers superfamily protein

Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G03840

Target	Alias	Description	ECC score	Gene Family Method
AT5G03150	JKD	C2H2-like zinc finger protein	0.03	OrthoFinder output from all 47 species
Adi_g012802	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g048017	AtIDD12, IDD12	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g56444	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g60888	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene34150.t1	IDD2, AtIDD2,...	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0223.g058834	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.33G056300.1	IDD2, AtIDD2,...	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g21742	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01010961001	MGP	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	OrthoFinder output from all 47 species
GSVIVT01025166001	JKD	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	OrthoFinder output from all 47 species
GSVIVT01035391001	AtIDD7, IDD7	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.05	OrthoFinder output from all 47 species
MA_36086g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Nbi_g03822	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g16325	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pnu_g22200	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g28092	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009246	JKD	C2H2 subclass IDD transcription factor & original...	0.04	OrthoFinder output from all 47 species
Solyc04g008500.4.1	IDD4, AtIDD4,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Spa_g15231	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Zm00001e026143_P001	MGP, Zm00001e026143	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Zm00001e027791_P001	AtIDD7, IDD7,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009957	epidermal cell fate specification	IEP	HCCA
BP	GO:0010091	trichome branching	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G03840 (MGP)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation