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AT1G02670


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG0002085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G02670
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Spa_g29098 No alias chromatin remodeling factor *(Rad5-like) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0004386 helicase activity ISS Interproscan
MF GO:0005524 ATP binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006281 DNA repair ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003691 double-stranded telomeric DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
CC GO:0031965 nuclear membrane IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 150 333
IPR001650 Helicase_C 509 622
No external refs found!