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  5. AT1G02290

AT1G02290


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45830.1); Has 134 Blast hits to 134 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 54; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).


Gene families : OG0001406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001406_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G02290

Target Alias Description ECC score Gene Family Method Actions
Adi_g016710 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Adi_g079790 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Adi_g105453 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Aev_g18222 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ala_g02533 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Als_g02587 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Cba_g12687 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ceric.20G007800.1 Ceric.20G007800 component *(NFRKB1) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ceric.25G069900.1 Ceric.25G069900 component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Dac_g22056 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Dcu_g08309 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Dde_g05388 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Len_g02429 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Len_g04834 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Lfl_g07100 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
MA_169230g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g41738 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Pir_g13602 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ppi_g05304 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Sam_g08339 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009896 positive regulation of catabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009954 proximal/distal pattern formation IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010305 leaf vascular tissue pattern formation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010528 regulation of transposition IEP HCCA
BP GO:0010529 negative regulation of transposition IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010589 leaf proximal/distal pattern formation IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016569 obsolete covalent chromatin modification IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0031331 positive regulation of cellular catabolic process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0035195 miRNA-mediated gene silencing IEP HCCA
MF GO:0035197 siRNA binding IEP HCCA
BP GO:0035279 miRNA-mediated gene silencing by mRNA destabilization IEP HCCA
BP GO:0043487 regulation of RNA stability IEP HCCA
BP GO:0043488 regulation of mRNA stability IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050779 RNA destabilization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061013 regulation of mRNA catabolic process IEP HCCA
BP GO:0061014 positive regulation of mRNA catabolic process IEP HCCA
BP GO:0061157 mRNA destabilization IEP HCCA
MF GO:0061980 regulatory RNA binding IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
BP GO:1903313 positive regulation of mRNA metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!