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  5. Pnu_g28688

Pnu_g28688 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : TUB-type transcription factor & original description: none


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g28688
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00153680 AtTLP3, TLP3,... RNA biosynthesis.transcriptional activation.TUB... 0.05 OrthoFinder output from all 47 species
AMTR_s00130p00115490 AtTLP7, TLP7,... RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
AT3G06380 TLP9, ATTLP9 tubby-like protein 9 0.02 OrthoFinder output from all 47 species
Adi_g016061 TLP2, AtTLP2 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26997 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.26G015500.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01014191001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
LOC_Os04g59130.1 TLP10, AtTLP10,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g48670.1 AtTLP7, TLP7,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g06630.2 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Len_g01171 TLP10, AtTLP10 TUB-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g25370 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28641 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028052_P001 AtTLP7, TLP7,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000007 Tubby_C 2 97
No external refs found!