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Heatmap: Cluster_24 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
Pnu_g03042 (CAD7)
 -0.41 -1.55 1.53 -5.83
Pnu_g03920 (TOC64-III)
 -0.03 -0.37 0.57 -0.39
-0.78 -1.38 1.59 -5.9
-2.13 -1.67 1.68 -1.95
-0.38 -2.34 1.6 -
0.03 -0.1 0.29 -0.27
-0.65 -1.4 1.54 -3.89
-1.19 -0.92 1.6 -
-0.5 -0.06 0.68 -0.45
-2.13 -0.68 1.58 -2.75
-0.36 -0.26 0.6 -0.2
-0.02 -2.03 1.44 -4.26
-0.19 -1.26 1.43 -6.38
0.3 -0.8 1.02 -2.55
-0.58 -1.42 1.55 -5.17
0.08 -0.58 1.18 -6.35
Pnu_g10518 (REF1)
 0.07 -0.76 1.15 -2.83
-0.48 -1.19 1.51 -
-0.22 -1.28 1.4 -3.52
-0.51 -1.31 1.52 -5.93
-0.47 -0.66 1.4 -
-0.31 -0.88 1.41 -
-0.1 -1.19 1.38 -5.0
-0.9 -0.48 1.19 -1.12
-0.03 -1.06 1.07 -1.2
0.07 -0.13 0.46 -0.59
0.11 -0.77 1.2 -4.78
0.1 -1.65 1.39 -
-0.59 -1.08 1.51 -5.62
-0.26 -0.74 1.31 -3.59
Pnu_g21508 (RPE)
 -0.88 -1.04 1.57 -
-0.95 -3.56 1.76 -
-0.4 -2.32 1.58 -4.32
- - 1.95 -2.94
0.09 -0.39 0.71 -0.91
Pnu_g21888 (AVP1)
 -1.6 -3.05 1.78 -3.26
-0.15 -2.42 1.4 -1.93
-1.85 -0.4 1.39 -1.54
-1.91 -2.62 1.79 -3.28
- - 2.0 -
-2.76 -4.26 1.93 -
0.13 -0.96 1.26 -
-0.19 -4.25 1.59 -4.08
Pnu_g22468 (PETE2)
 -0.06 -1.17 1.33 -3.61
-0.09 -2.18 1.47 -3.96
-2.77 - 1.95 -
-0.33 -2.57 1.58 -4.69
-1.1 -3.38 1.68 -2.09
-2.07 -2.29 1.66 -1.31
-1.48 -1.3 1.69 -6.34
-2.75 - 1.95 -
-1.31 -1.45 1.69 -
0.02 -2.09 1.46 -
-1.44 -0.55 1.52 -3.78
-0.89 -0.71 1.46 -3.48
-0.25 -0.51 0.88 -0.7
-0.45 -3.14 1.66 -
Pnu_g23258 (PSBR)
 -0.21 -1.06 1.36 -3.57
-0.48 -1.58 1.52 -3.64
-0.55 -2.64 1.65 -5.35
-0.19 -0.84 1.31 -3.63
-0.5 -1.12 1.47 -4.14
-1.16 -1.54 1.64 -3.46
-0.15 -1.61 1.44 -4.35
-1.28 -1.05 1.64 -
0.11 -1.61 1.37 -
-0.64 -1.85 1.61 -5.2
0.34 -0.84 1.09 -4.28
-0.12 -0.0 0.69 -1.08
-0.77 -1.59 1.38 -1.04
0.21 -1.1 1.2 -3.8
-0.09 -2.31 1.51 -6.24
-0.67 -0.9 1.5 -
-1.0 -1.87 1.67 -4.36
-0.08 -3.94 1.52 -3.11
-0.82 -1.93 1.61 -3.21
- - 2.0 -
-1.37 -0.39 1.51 -
-0.87 -0.59 1.18 -0.94
-0.27 -1.23 1.43 -4.71
-1.21 -0.43 1.46 -3.79
-0.57 -1.8 1.58 -4.46
-2.02 -1.42 1.63 -1.81
-0.46 -1.01 1.44 -4.11
-0.24 -1.19 1.43 -5.7
0.22 -0.95 1.2 -5.95
-0.34 -1.19 1.45 -4.67
-0.34 -1.59 1.5 -4.21
-1.72 -1.46 1.74 -
-0.25 -1.46 1.44 -3.54
-1.63 -0.62 1.56 -3.79
-0.28 -1.11 1.41 -4.25
-0.57 -1.56 1.45 -1.98
0.02 -0.31 0.62 -0.65
Pnu_g27005 (ROPGEF5)
 -2.24 - 1.92 -
-1.17 -0.34 1.21 -1.15
-0.66 -3.57 1.72 -
-0.4 -1.18 1.48 -
-0.13 -1.21 1.38 -4.5
-0.06 -0.93 1.32 -5.29
-0.88 -2.18 1.69 -5.59
-0.43 -0.6 1.34 -3.83
Pnu_g27633 (ACS)
 -0.19 -0.95 1.38 -6.52
-0.09 -0.03 0.32 -0.27
0.11 -2.26 1.44 -
- - 1.93 -2.47
-1.22 - 1.84 -
-1.23 -0.93 1.61 -
-0.13 -3.03 1.57 -
-3.45 -3.36 1.82 -1.89
-0.53 -2.04 1.61 -
Pnu_g28688 (TLP3)
 -0.83 -0.2 1.32 -3.87
0.11 -1.48 1.21 -2.05
0.13 -1.39 1.34 -
-0.42 -1.97 1.58 -
-0.8 -2.66 1.71 -
-0.46 -0.81 1.34 -2.56
-2.37 -1.28 1.71 -2.94
-1.32 -2.23 1.76 -
-0.07 -0.78 1.21 -2.84
-0.06 -1.0 1.18 -1.85
-0.28 -1.95 1.5 -3.48
0.13 -0.89 1.02 -1.55
-0.59 -1.38 1.56 -
-0.24 -0.95 1.35 -3.56
-0.26 -1.76 1.48 -3.58
-0.95 -2.04 1.7 -
Pnu_g33752 (PTR5)
 -0.48 -0.25 0.95 -0.98
-0.23 -2.18 1.54 -5.7

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.