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Description : not classified & original description: none
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g28259 | |
| Cluster | HCCA: Cluster_70 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G10560 | PUB18, ATPUB18 | plant U-box 18 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G71020 | No alias | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G42340 | PUB15 | Plant U-Box 15 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g009233 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g056335 | PUB8, B80 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene44181.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G010300.1 | ATPUB17, PUB17,... | not classified & original description: pacid=50611933... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032778001 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g51130.1 | PUB15, LOC_Os06g51130 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_27512g0010 | PUB15 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_69133g0010 | PUB14, ATPUB14 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g09964 | PUB18, ATPUB18 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26740 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g11886 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54242 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001174_P001 | PUB13, ATPUB13,... | E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014566_P002 | PUB9, ATPUB9,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000796 | condensin complex | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007076 | mitotic chromosome condensation | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| BP | GO:0030261 | chromosome condensation | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:1903047 | mitotic cell cycle process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |