Heatmap: Cluster_70 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
-0.62 -0.61 1.06 -0.73
-0.96 -0.82 1.21 -0.73
-2.46 -2.28 1.74 -1.87
Pnu_g06969 (SPK1)
-0.53 -0.38 0.81 -0.35
Pnu_g07934 (KCR1)
-0.93 -1.21 1.49 -2.04
-1.81 -2.09 1.75 -3.09
-0.61 -0.86 1.22 -1.09
-1.11 -0.88 1.29 -0.87
Pnu_g12232 (emb1011)
-0.79 -0.93 1.22 -0.82
Pnu_g13833 (ABCA1)
-0.9 -1.08 1.33 -1.08
-1.33 -1.68 1.49 -1.07
Pnu_g16146 (PIP5K9)
-0.68 -1.86 1.44 -1.36
-4.1 -1.73 1.74 -1.78
-0.57 -0.56 0.97 -0.53
Pnu_g18021 (ATRX)
-0.26 -0.19 0.49 -0.18
-7.32 - 1.93 -2.41
-0.87 -2.08 1.54 -1.7
Pnu_g19336 (SLY1)
-6.89 -3.77 1.9 -2.5
-0.67 -0.47 0.99 -0.59
-2.31 -6.64 1.84 -2.22
- -2.62 1.92 -4.52
-5.35 -6.36 1.98 -6.53
-2.68 -2.61 1.88 -
-2.69 - 1.94 -
-1.44 -3.87 1.76 -2.45
- -3.59 1.84 -1.62
-1.19 -1.08 1.37 -1.0
Pnu_g22525 (PDR11)
-5.31 - 1.98 -5.42
- - 2.0 -
-1.81 -1.91 1.62 -1.43
-2.79 -5.66 1.93 -4.93
-2.11 -5.54 1.89 -4.66
Pnu_g24115 (ATM)
-0.67 -0.76 1.09 -0.6
-1.08 -1.82 1.57 -1.85
-0.31 -0.28 0.62 -0.27
Pnu_g24648 (TPST)
-3.19 -3.37 1.84 -2.26
-3.28 -3.34 1.93 -
Pnu_g24737 (ATPT2)
-1.18 -2.09 1.58 -1.56
- -5.67 1.99 -
Pnu_g24819 (GRF1)
-3.8 -4.69 1.94 -4.22
Pnu_g24869 (FaTA)
-7.56 -7.44 2.0 -10.23
-1.38 - 1.85 -
Pnu_g25755 (LACS4)
-3.17 -3.68 1.9 -3.75
- - 2.0 -
Pnu_g25785 (BAS1)
-0.69 -0.84 1.21 -0.99
-1.62 - 1.88 -
-3.55 - 1.93 -3.29
-2.46 -2.85 1.82 -2.64
-2.16 -1.44 1.65 -1.87
Pnu_g27478 (TPR5)
-0.98 -1.16 1.43 -1.51
-1.39 -4.61 1.79 -3.12
-2.25 -4.64 1.87 -3.51
- - 2.0 -
- -5.07 1.93 -2.56
- - 2.0 -
-3.45 - 1.97 -
Pnu_g28777 (TUB6)
-3.6 -2.71 1.82 -2.15
-3.33 -4.32 1.86 -2.25
-1.6 -2.16 1.78 -
-2.12 - 1.91 -
-2.37 -3.24 1.89 -
-0.58 -0.81 1.09 -0.68
-1.91 -2.56 1.7 -1.69

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.