1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g27830

Pnu_g27830


Description : borate transporter *(BOR) & original description: none


Gene families : OG0000669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000669_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g27830
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00203390 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AMTR_s00052p00085150 ATBOR4, BOR4,... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AMTR_s00096p00091060 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AT1G15460 ATBOR4, BOR4 HCO3- transporter family 0.02 OrthoFinder output from all 47 species
AT3G62270 No alias HCO3- transporter family 0.03 OrthoFinder output from all 47 species
Adi_g050293 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055272 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13939 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05532 No alias borate transporter *(BOR) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05031 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g08020.1 ATBOR4, BOR4,... borate transporter (BOR) 0.03 OrthoFinder output from all 47 species
LOC_Os12g37840.1 LOC_Os12g37840 borate transporter (BOR) 0.03 OrthoFinder output from all 47 species
MA_101395g0010 No alias borate transporter (BOR) 0.02 OrthoFinder output from all 47 species
Mp4g00440.1 No alias borate transporter (BOR) 0.02 OrthoFinder output from all 47 species
Msp_g34242 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15025 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002898_P002 Zm00001e002898 borate transporter (BOR) 0.04 OrthoFinder output from all 47 species
Zm00001e016734_P002 ATBOR4, BOR4,... borate transporter (BOR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006820 monoatomic anion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011531 HCO3_transpt-like_TM_dom 249 421
IPR011531 HCO3_transpt-like_TM_dom 510 599
IPR011531 HCO3_transpt-like_TM_dom 55 227
No external refs found!