1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g27392

Pnu_g27392


Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0007441 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007441_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g27392
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Aev_g07746 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aop_g58068 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007639 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Ceric.24G024400.1 Ceric.24G024400 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Dac_g08449 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ehy_g19210 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Lfl_g01608 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Nbi_g09082 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ore_g09118 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 91 290
IPR015353 Rubisco_LSMT_subst-bd 323 438
No external refs found!