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  5. Pnu_g27083

Pnu_g27083


Description : not classified & original description: none


Gene families : OG0002005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g27083
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT1G79510 No alias Uncharacterized conserved protein (DUF2358) 0.02 OrthoFinder output from all 47 species
Ceric.03G031300.1 Ceric.03G031300 not classified & original description: pacid=50572886... 0.03 OrthoFinder output from all 47 species
Ceric.04G066900.1 Ceric.04G066900 not classified & original description: pacid=50632263... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000802.28 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os04g52330.1 LOC_Os04g52330 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g03130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006957_P001 Zm00001e006957 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 181 260
No external refs found!