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  5. Pnu_g26950

Pnu_g26950 (UBC16)


Aliases : UBC16

Description : E2 ubiquitin-conjugating enzyme *(UBC15) & original description: none


Gene families : OG0001468 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g26950
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00234950 UBC18,... Probable ubiquitin-conjugating enzyme E2 18... 0.02 OrthoFinder output from all 47 species
Adi_g040052 UBC18 E2 ubiquitin-conjugating enzyme *(UBC15) & original... 0.03 OrthoFinder output from all 47 species
MA_56255g0010 UBC16 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g09986 UBC16 E2 ubiquitin-conjugating enzyme *(UBC15) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 88 222
No external refs found!