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Aliases : REME1
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g26686 | |
| Cluster | HCCA: Cluster_42 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272900 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g13039 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18096 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g32888 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04742 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07129 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33154 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g29513 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g37590 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07700 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28486 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g39230 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene65846.t1 | OSB3, Aspi01Gene65846 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009022 | No alias | not classified & original description: CDS=1-2334 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0010.g012382 | OTP84 | not classified & original description: CDS=1-2100 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0118.g046610 | OTP86 | not classified & original description: CDS=1-2490 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0143.g051490 | No alias | not classified & original description: CDS=1-2688 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0626.g079975 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2118 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s1334.g101644 | No alias | not classified & original description: CDS=1-3543 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19473 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29798 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29852 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29963 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g31516 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34897 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G036800.1 | VAC1, ECB2,... | not classified & original description: pacid=50605276... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18410 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g45442 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12504 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03922 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04874 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06719 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22987 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g35118 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50292 | SLO1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g51368 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17712 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g26396 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000072001 | No alias | Pentatricopeptide repeat-containing protein At3g05340... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01010898001 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033654001 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g58330.1 | LPA66, LOC_Os02g58330 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g04325 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g14977 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17558 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g25856 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g44370 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g57437 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g59017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g17476 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g37815 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_103698g0030 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| MA_63139g0020 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| MA_82595g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03152 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g36833 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g41395 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g46446 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g07318 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g25474 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g29795 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g33905 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g35296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g07049 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13014 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13547 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g31112 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g46859 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03216 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g15317 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30296 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30304 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05095 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07615 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g09062 | EMB2261 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13340 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g17845 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g30623 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g39260 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53558 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g61239 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000499 | CRR22 | EC_2.4 glycosyltransferase & original description: CDS=1-2862 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000505 | CRR2 | not classified & original description: CDS=1-1110 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0010.g004867 | No alias | not classified & original description: CDS=342-1943 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008413 | No alias | not classified & original description: CDS=1-1578 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015029 | No alias | not classified & original description: CDS=1-2931 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0106.g020289 | No alias | not classified & original description: CDS=1-1509 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g06265 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g08102 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19797 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36339 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g43840 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17629 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g24828 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26548 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30348 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g35676 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g39862 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g41566 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007462_P001 | Zm00001e007462 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014549_P001 | CRR22, Zm00001e014549 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | HCCA |
| CC | GO:0005787 | signal peptidase complex | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006465 | signal peptide processing | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| CC | GO:1905368 | peptidase complex | IEP | HCCA |
| No external refs found! |