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  5. Pnu_g26428

Pnu_g26428


Description : not classified & original description: none


Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g26428
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G22530 PATL2 PATELLIN 2 0.03 OrthoFinder output from all 47 species
AT1G72150 PATL1 PATELLIN 1 0.04 OrthoFinder output from all 47 species
Adi_g077645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24495.t1 Aspi01Gene24495 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G040600.1 Ceric.37G040600 not classified & original description: pacid=50615839... 0.02 OrthoFinder output from all 47 species
Ceric.39G036600.1 Ceric.39G036600 not classified & original description: pacid=50583070... 0.02 OrthoFinder output from all 47 species
Dac_g11259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036782001 No alias Patellin-4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os05g35460.1 LOC_Os05g35460 Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_19741g0010 No alias Patellin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_9244g0010 No alias Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp4g06280.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp4g16700.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp4g16720.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g01183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019109_P003 Zm00001e019109 Patellin-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e026912_P001 Zm00001e026912 Patellin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e031502_P004 Zm00001e031502 Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 339 496
IPR011074 CRAL/TRIO_N_dom 286 313
No external refs found!