1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g26222

Pnu_g26222 (ARI8, ATARI8)


Aliases : ARI8, ATARI8

Description : RBR-Ariadne-class E3 ubiquitin ligase & original description: none


Gene families : OG0001677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001677_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g26222
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Aob_g18815 ARI7, ATARI7 RBR-Ariadne-class E3 ubiquitin ligase & original... 0.03 OrthoFinder output from all 47 species
Zm00001e021037_P001 ARI7, ATARI7,... RBR-Ariadne-class E3 ubiquitin ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR045840 Ariadne 364 561
IPR002867 IBR_dom 216 277
IPR002867 IBR_dom 294 341
No external refs found!