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  5. Pnu_g25575

Pnu_g25575


Description : not classified & original description: none


Gene families : OG0001459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25575

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00180p00057430 evm_27.TU.AmTr_v1... Protein DMP5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G02430 No alias Protein of unknown function (DUF679) 0.02 OrthoFinder output from all 47 species
AT3G21550 DMP2, AtDMP2 DUF679 domain membrane protein 2 0.05 OrthoFinder output from all 47 species
AT4G18425 No alias Protein of unknown function (DUF679) 0.05 OrthoFinder output from all 47 species
Ceric.02G032300.1 Ceric.02G032300 not classified & original description: pacid=50584978... 0.04 OrthoFinder output from all 47 species
Ceric.35G048900.1 Ceric.35G048900 not classified & original description: pacid=50581819... 0.03 OrthoFinder output from all 47 species
Dcu_g15479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g38021 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g10217 DMP2, AtDMP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023254001 No alias Protein DMP5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g29240.1 DMP2, AtDMP2,... Protein DMP5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g45080.1 DMP2, AtDMP2,... Protein DMP2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g00346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10186862g0010 DMP1, AtDMP1 Protein DMP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_203154g0010 No alias Protein DMP6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g17600.1 No alias Protein DMP5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp4g17620.1 DMP1, AtDMP1 Protein DMP5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g12170.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g12180.1 No alias Protein DMP5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g03820.1 No alias Protein DMP3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp6g08250.1 No alias Protein DMP5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp6g11700.1 No alias Protein DMP6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp6g12240.1 No alias Protein DMP6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g10353 AtDMP7, DMP7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g080490.2.1 DMP2, AtDMP2,... Protein DMP2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e028609_P001 Zm00001e028609 Protein DMP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e029123_P001 Zm00001e029123 Protein DMP3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR007770 DMP 52 206
No external refs found!